RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 FKBP15Q5T1M5 1219 aa21.26■□□□□ 0.99
HDAC4-209ENST00000487617 PIWIL1Q96J94 861 aaKnown RBP21.26■□□□□ 0.99
HDAC4-209ENST00000487617 FCRL2Q96LA5 508 aaPredicted RBP21.26■□□□□ 0.99
HDAC4-209ENST00000487617 NAA15Q9BXJ9 866 aaKnown RBP21.26■□□□□ 0.99
HDAC4-209ENST00000487617 PDCL3Q9H2J4 239 aa21.26■□□□□ 0.99
HDAC4-209ENST00000487617 PLCB1Q9NQ66 1216 aa21.26■□□□□ 0.99
HDAC4-209ENST00000487617 CACNA2D2Q9NY47 1150 aa21.26■□□□□ 0.99
HDAC4-209ENST00000487617 CFAP54Q96N23 3096 aa21.26■□□□□ 0.99
HDAC4-209ENST00000487617 GFRA2O00451 464 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 RHOBTB1O94844 696 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 SNX16P57768 344 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 LMNB2Q03252 620 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 TAF5Q15542 800 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 RFWD3Q6PCD5 774 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 C11orf74Q86VG3 221 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 ANKRD20A12PQ8NF67 263 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 UCMAQ8WVF2 138 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 AZIN2Q96A70 460 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 ERLEC1Q96DZ1 483 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 GABRG3Q99928 467 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 STK33Q9BYT3 514 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 DUSP15Q9H1R2 295 aaPredicted RBP21.25■□□□□ 0.99
HDAC4-209ENST00000487617 ARRDC1-AS1Q9H2J1 176 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 SYNCQ9H7C4 482 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 SEMA4GQ9NTN9 838 aa21.25■□□□□ 0.99
HDAC4-209ENST00000487617 A0A1W2PQF6 199 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 ZBTB24O43167 697 aaPredicted RBP21.24■□□□□ 0.99
HDAC4-209ENST00000487617 EPN2O95208 641 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 CYP11B1P15538 503 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 SLC6A4P31645 630 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 KLK7P49862 253 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 SGSHP51688 502 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 CSRP2Q16527 193 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 DCAF6Q58WW2 860 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 FAM133BQ5BKY9 247 aaKnown RBP21.24■□□□□ 0.99
HDAC4-209ENST00000487617 EFHC1Q5JVL4 640 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 OR6B2Q6IFH4 312 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 OLIG1Q8TAK6 271 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 IPO4Q8TEX9 1081 aaKnown RBP21.24■□□□□ 0.99
HDAC4-209ENST00000487617 RLN3Q8WXF3 142 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 RMDN1Q96DB5 314 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 SLC39A13Q96H72 371 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 DDX50Q9BQ39 737 aaKnown RBP21.24■□□□□ 0.99
HDAC4-209ENST00000487617 ELOVL2Q9NXB9 296 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 TMEM63CQ9P1W3 806 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 RAD54BQ9Y620 910 aa21.24■□□□□ 0.99
HDAC4-209ENST00000487617 F8VZ95 297 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 IRAK2O43187 625 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 TRUB2O95900 331 aaKnown RBP21.23■□□□□ 0.99
HDAC4-209ENST00000487617 MOCS2O96007 188 aaPredicted RBP21.23■□□□□ 0.99
HDAC4-209ENST00000487617 ERBB2P04626 1255 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 GLI1P08151 1106 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 GABRG2P18507 467 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 BCKDHBP21953 392 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 COPB1P53618 953 aaKnown RBP21.23■□□□□ 0.99
HDAC4-209ENST00000487617 TYRO3Q06418 890 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 EIF4HQ15056 248 aaKnown RBP21.23■□□□□ 0.99
HDAC4-209ENST00000487617 PTPN20Q4JDL3 420 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 PIK3R6Q5UE93 754 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 TAF3Q5VWG9 929 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 NADSYN1Q6IA69 706 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 KIAA1211LQ6NV74 962 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 FAM183BPQ6ZVS7 135 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 DEFB106AQ8N104 65 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 TMEM35BQ8NCS4 154 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 SPACA7Q96KW9 195 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 IRX2Q9BZI1 471 aaPredicted RBP21.23■□□□□ 0.99
HDAC4-209ENST00000487617 CIPCQ9C0C6 399 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 GANQ9H2C0 597 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 FAM207AQ9NSI2 230 aaPredicted RBP21.23■□□□□ 0.99
HDAC4-209ENST00000487617 ASNSD1Q9NWL6 643 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 THAP10Q9P2Z0 257 aaPredicted RBP21.23■□□□□ 0.99
HDAC4-209ENST00000487617 LIMA1Q9UHB6 759 aaKnown RBP21.23■□□□□ 0.99
HDAC4-209ENST00000487617 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.23■□□□□ 0.99
HDAC4-209ENST00000487617 STON1Q9Y6Q2 735 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 ZNF292O60281 2723 aa21.23■□□□□ 0.99
HDAC4-209ENST00000487617 PRR5-ARHGAP8B1AHC4 643 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 WASH3PC4AMC7 463 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 NPC1O15118 1278 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 TIMM44O43615 452 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 TBL1XO60907 577 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 HSF2BPO75031 334 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 GRAP2O75791 330 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 APOEP02649 317 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 CDK11BP21127 795 aaKnown RBP21.22■□□□□ 0.99
HDAC4-209ENST00000487617 P2RY2P41231 377 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 PITX1P78337 314 aaPredicted RBP21.22■□□□□ 0.99
HDAC4-209ENST00000487617 ARHGAP8P85298 464 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 CDK17Q00537 523 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 ARID5AQ03989 594 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 BYSLQ13895 437 aaKnown RBP21.22■□□□□ 0.99
HDAC4-209ENST00000487617 E2F5Q15329 346 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 CCDC6Q16204 474 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 ZC3H12AQ5D1E8 599 aaKnown RBP21.22■□□□□ 0.99
HDAC4-209ENST00000487617 MPP7Q5T2T1 576 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 SLC2A13Q96QE2 648 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 FAM204AQ9H8W3 233 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 ABCB8Q9NUT2 735 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 STIM2Q9P246 746 aa21.22■□□□□ 0.99
HDAC4-209ENST00000487617 PCDHGA5Q9Y5G8 931 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 640 ms