RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ANKRD20A3Q5VUR7 823 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 ZNF534Q76KX8 674 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 XAB2Q9HCS7 855 aaKnown RBP26.96■■□□□ 1.91
HLA-C-208ENST00000487245 ALG13Q9NP73 1137 aaKnown RBP26.96■■□□□ 1.91
HLA-C-208ENST00000487245 RNF19AQ9NV58 838 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 FLRT1Q9NZU1 646 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 KRT38O76015 456 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 APRTP07741 180 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 SERPINB9P50453 376 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 CMPK2Q5EBM0 449 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 UNC5AQ6ZN44 842 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 CTAGE3PQ8IX95 158 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 PLCD3Q8N3E9 789 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 SMG8Q8ND04 991 aaKnown RBP26.96■■□□□ 1.91
HLA-C-208ENST00000487245 GSDMBQ8TAX9 411 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 CCDC110Q8TBZ0 833 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 PPP1R13LQ8WUF5 828 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 KCTD13Q8WZ19 329 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 EBNA1BP2Q99848 306 aaKnown RBP26.96■■□□□ 1.91
HLA-C-208ENST00000487245 BTBD10Q9BSF8 475 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 NKX1-2Q9UD57 310 aaPredicted RBP26.96■■□□□ 1.91
HLA-C-208ENST00000487245 FZD10Q9ULW2 581 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 GBE1Q04446 702 aa26.95■■□□□ 1.9
HLA-C-208ENST00000487245 ZNF618Q5T7W0 954 aa26.95■■□□□ 1.9
HLA-C-208ENST00000487245 SMYD2Q9NRG4 433 aa26.95■■□□□ 1.9
HLA-C-208ENST00000487245 ARL8BQ9NVJ2 186 aa26.95■■□□□ 1.9
HLA-C-208ENST00000487245 SIRPGQ9P1W8 387 aa26.95■■□□□ 1.9
HLA-C-208ENST00000487245 TPBGLP0DKB5 382 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 GM2AP17900 193 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 HOXC8P31273 242 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 SARNPP82979 210 aaKnown RBP26.94■■□□□ 1.9
HLA-C-208ENST00000487245 SLC10A2Q12908 348 aaPredicted RBP26.94■■□□□ 1.9
HLA-C-208ENST00000487245 SEMA5AQ13591 1074 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 GPR162Q16538 588 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 DBN1Q16643 649 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 ATG16L1Q676U5 607 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 KCNT2Q6UVM3 1135 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 TIFABQ6ZNK6 161 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 CDHR3Q6ZTQ4 885 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 PIGZQ86VD9 579 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 OSTM1Q86WC4 334 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 HACE1Q8IYU2 909 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 DEFB106AQ8N104 65 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 MIPEPQ99797 713 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 KCNK4Q9NYG8 393 aa26.94■■□□□ 1.9
HLA-C-208ENST00000487245 ZNF189O75820 626 aaPredicted RBP26.93■■□□□ 1.9
HLA-C-208ENST00000487245 NEFHP12036 1026 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 PTPN1P18031 435 aaKnown RBP26.93■■□□□ 1.9
HLA-C-208ENST00000487245 NOS2P35228 1153 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 SULT1E1P49888 294 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 ATXN1P54253 815 aaKnown RBP26.93■■□□□ 1.9
HLA-C-208ENST00000487245 SYCP2LQ5T4T6 812 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 FAXCQ5TGI0 409 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 HEATR6Q6AI08 1181 aaKnown RBP26.93■■□□□ 1.9
HLA-C-208ENST00000487245 TAF2Q6P1X5 1199 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 CCDC185Q8N715 623 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 CADM1Q9BY67 442 aaKnown RBP26.93■■□□□ 1.9
HLA-C-208ENST00000487245 DENND2DQ9H6A0 471 aaPredicted RBP26.93■■□□□ 1.9
HLA-C-208ENST00000487245 GOLGA2P5Q9HBQ8 144 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 LRRC42Q9Y546 428 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 PCDHA11Q9Y5I1 949 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.93■■□□□ 1.9
HLA-C-208ENST00000487245 CYB561D2O14569 222 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 DGKIO75912 1065 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 ATP5BP06576 529 aaKnown RBP26.93■■□□□ 1.9
HLA-C-208ENST00000487245 NPR3P17342 541 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 CNTFP26441 200 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 SERPINB3P29508 390 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 FDFT1P37268 417 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 MRPS5P82675 430 aaKnown RBP26.93■■□□□ 1.9
HLA-C-208ENST00000487245 NCBP2-AS2Q69YL0 99 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 TWF2Q6IBS0 349 aaKnown RBP26.93■■□□□ 1.9
HLA-C-208ENST00000487245 TFB1MQ8WVM0 346 aaKnown RBP26.93■■□□□ 1.9
HLA-C-208ENST00000487245 NUDCD1Q96RS6 583 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 FERMT1Q9BQL6 677 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 SLC38A7Q9NVC3 462 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 STAP1Q9ULZ2 295 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 USP3Q9Y6I4 520 aa26.93■■□□□ 1.9
HLA-C-208ENST00000487245 H3BRJ5 948 aa26.92■■□□□ 1.9
HLA-C-208ENST00000487245 I3L4J1 428 aa26.92■■□□□ 1.9
HLA-C-208ENST00000487245 BIRC5O15392 142 aa26.92■■□□□ 1.9
HLA-C-208ENST00000487245 METTL18O95568 372 aa26.92■■□□□ 1.9
HLA-C-208ENST00000487245 TKTP29401 623 aaKnown RBP26.92■■□□□ 1.9
HLA-C-208ENST00000487245 STEAP4Q687X5 459 aa26.92■■□□□ 1.9
HLA-C-208ENST00000487245 C4orf50Q6ZRC1 276 aa26.92■■□□□ 1.9
HLA-C-208ENST00000487245 LENG1Q96BZ8 264 aaPredicted RBP26.92■■□□□ 1.9
HLA-C-208ENST00000487245 OXNAD1Q96HP4 312 aaPredicted RBP26.92■■□□□ 1.9
HLA-C-208ENST00000487245 MMADHCQ9H3L0 296 aaPredicted RBP26.92■■□□□ 1.9
HLA-C-208ENST00000487245 DTLQ9NZJ0 730 aa26.92■■□□□ 1.9
HLA-C-208ENST00000487245 KPNA6O60684 536 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 CSH1P0DML2 217 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 CSH2P0DML3 217 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 MLNP12872 115 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 AMPD1P23109 780 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 CRHR1P34998 444 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 RGS2P41220 211 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 ZBTB16Q05516 673 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 ADIGQ0VDE8 80 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 STXBP5Q5T5C0 1151 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 ARRDC4Q8NCT1 418 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms