RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 CDH9Q9ULB4 789 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 DNM3Q9UQ16 869 aa12.84□□□□□ -0.35
ATPAF1-205ENST00000487193 MED13Q9UHV7 2174 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 GP1BAP07359 652 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 UQCRFS1P47985 274 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 OXCT1P55809 520 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 EVCP57679 992 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 ZBTB16Q05516 673 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 E2F5Q15329 346 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 MAPRE1Q15691 268 aaKnown RBP12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 MDH1BQ5I0G3 518 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 TMEM215Q68D42 235 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 ANKS1BQ7Z6G8 1248 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 CCDC83Q8IWF9 413 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 SCAMP5Q8TAC9 235 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 PIWIL1Q96J94 861 aaKnown RBP12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 APOLD1Q96LR9 279 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 KLF16Q9BXK1 252 aaPredicted RBP12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 TMEM30AQ9NV96 361 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 FBXL12Q9NXK8 326 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 KCNG1Q9UIX4 513 aa12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 TDRD6O60522 2096 aaKnown RBP12.83□□□□□ -0.36
ATPAF1-205ENST00000487193 A0A1B0GTL3 188 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 ITGA2BP08514 1039 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 KRT19P08727 400 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 WT1P19544 449 aaPredicted RBP12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 DGKAP23743 735 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 POLE2P56282 527 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 TFAMQ00059 246 aaKnown RBP12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 CRTC1Q6UUV9 634 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 ZC3H18Q86VM9 953 aaKnown RBP12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 CSGALNACT2Q8N6G5 542 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 TOP6BLQ8N6T0 577 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 CYB5D2Q8WUJ1 264 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 OVCA2Q8WZ82 227 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 FAM84AQ96KN4 292 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 NEUROG2Q9H2A3 272 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 KDM4CQ9H3R0 1056 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 CAAP1Q9H8G2 361 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 BRMS1Q9HCU9 246 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 PRSS16Q9NQE7 514 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 SERGEFQ9UGK8 458 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 CLEC4EQ9ULY5 219 aa12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 COL27A1Q8IZC6 1860 aaPredicted RBP12.82□□□□□ -0.36
ATPAF1-205ENST00000487193 OTOGQ6ZRI0 2925 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 CPED1A4D0V7 1026 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 LRRC72A6NJI9 287 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 RTN3O95197 1032 aaPredicted RBP12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 KRT7P08729 469 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 CD97P48960 835 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 PGFP49763 221 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 SFSWAPQ12872 951 aaKnown RBP12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 TOB2Q14106 344 aaPredicted RBP12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 SNX30Q5VWJ9 437 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 FYB2Q5VWT5 728 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 ADALQ6DHV7 355 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 SLC39A4Q6P5W5 647 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 BORAQ6PGQ7 559 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 RBM44Q6ZP01 1051 aaKnown RBP12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 MFSD2AQ8NA29 543 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 RBBP8NLQ8NC74 664 aaPredicted RBP12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 MYCBPAPQ8TBZ2 947 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 GRAMD1AQ96CP6 724 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 GDAP2Q9NXN4 497 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 SEPT10Q9P0V9 454 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 SEL1LQ9UBV2 794 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 PLA2G4CQ9UP65 541 aa12.81□□□□□ -0.36
ATPAF1-205ENST00000487193 LY6G6EA0A0G2JKS1 128 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 NPHP3-ACAD11A0A0J9YXS1 232 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 A0A1W2PP55 124 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 ANKRD63C9JTQ0 380 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 CLDN5O00501 218 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 TIMM44O43615 452 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 LZTS3O60299 673 aaPredicted RBP12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 TLR5O60602 858 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 SEMA7AO75326 666 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 GNLYP22749 145 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 TUBP50607 506 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 MLLT10P55197 1068 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 GOLGA8FQ08AF8 430 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 GOLGA8DPQ0D2H9 430 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 ZNF174Q15697 407 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 C1QL3Q5VWW1 255 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 ZNF776Q68DI1 518 aaPredicted RBP12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 C1orf127Q8N9H9 656 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 OR2T34Q8NGX1 318 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 SNX29Q8TEQ0 813 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 KBTBD7Q8WVZ9 684 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 TMEM245Q9H330 911 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 PABPC3Q9H361 631 aaKnown RBP12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 MTG2Q9H4K7 406 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 ORC3Q9UBD5 711 aaPredicted RBP12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 U3KQA8 63 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 DOCK9Q9BZ29 2069 aa12.8□□□□□ -0.36
ATPAF1-205ENST00000487193 A0A087X0B3 334 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 CCDC187A0A096LP49 1063 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 TISP43B9A030 160 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 H0YCG3 227 aa12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 CASC3O15234 703 aaKnown RBP12.79□□□□□ -0.36
ATPAF1-205ENST00000487193 RNASEH2AO75792 299 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms