RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 ZDHHC17Q8IUH5 632 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 DEFB106AQ8N104 65 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 ZNF687Q8N1G0 1237 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 WDTC1Q8N5D0 677 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 TERB1Q8NA31 727 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 RNF214Q8ND24 703 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 C18orf8Q96DM3 657 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 C11orf70Q9BRQ4 267 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 PRMT8Q9NR22 394 aaPredicted RBP10.63□□□□□ -0.71
NEK4-204ENST00000487068 DDIT4Q9NX09 232 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 NOCTQ9UK39 431 aaKnown RBP10.63□□□□□ -0.71
NEK4-204ENST00000487068 FBXO4Q9UKT5 387 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 STAP1Q9ULZ2 295 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 TLR6Q9Y2C9 796 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 A0A1W2PQC6 194 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 LRRC53A6NM62 1247 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 IRAK2O43187 625 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 CACNG3O60359 315 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 GREM1O60565 184 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 TRUB2O95900 331 aaKnown RBP10.62□□□□□ -0.71
NEK4-204ENST00000487068 GLI1P08151 1106 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 GBP1P32455 592 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 GRIA2P42262 883 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 SULT1E1P49888 294 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 NRLP54845 237 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 FMO1Q01740 532 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 SLC6A3Q01959 620 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 GAS6Q14393 721 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 GAB4Q2WGN9 574 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 TDRD12Q587J7 1177 aaKnown RBP10.62□□□□□ -0.71
NEK4-204ENST00000487068 PKN3Q6P5Z2 889 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 TRIM72Q6ZMU5 477 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 MMS22LQ6ZRQ5 1243 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 SLC26A9Q7LBE3 791 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 CHSY1Q86X52 802 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 CCDC117Q8IWD4 279 aaPredicted RBP10.62□□□□□ -0.71
NEK4-204ENST00000487068 ETFBKMTQ8IXQ9 262 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 CPXM2Q8N436 756 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 CCDC33Q8N5R6 958 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 ZNF513Q8N8E2 541 aaPredicted RBP10.62□□□□□ -0.71
NEK4-204ENST00000487068 ATP6V0D2Q8N8Y2 350 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 ATRIPQ8WXE1 791 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 DDX1Q92499 740 aaKnown RBP10.62□□□□□ -0.71
NEK4-204ENST00000487068 RUBCNQ92622 972 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 NAP1L5Q96NT1 182 aaPredicted RBP10.62□□□□□ -0.71
NEK4-204ENST00000487068 HHIPQ96QV1 700 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 DDX50Q9BQ39 737 aaKnown RBP10.62□□□□□ -0.71
NEK4-204ENST00000487068 ZDHHC4Q9NPG8 344 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 METTL5Q9NRN9 209 aaKnown RBP10.62□□□□□ -0.71
NEK4-204ENST00000487068 ASNSD1Q9NWL6 643 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 MARK1Q9P0L2 795 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 IFNKQ9P0W0 207 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 SLC12A6Q9UHW9 1150 aa10.62□□□□□ -0.71
NEK4-204ENST00000487068 MUC22E2RYF6 1773 aaPredicted RBP10.62□□□□□ -0.71
NEK4-204ENST00000487068 M0QYT0 321 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 TRIM24O15164 1050 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 ACSL4O60488 711 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 TBL1XO60907 577 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 KLF8O95600 359 aaPredicted RBP10.61□□□□□ -0.71
NEK4-204ENST00000487068 LATS1O95835 1130 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 IGLV3-27P01718 113 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 FYNP06241 537 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 ABCB4P21439 1286 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 CDH5P33151 784 aaPredicted RBP10.61□□□□□ -0.71
NEK4-204ENST00000487068 ZNF445P59923 1031 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 PITX1P78337 314 aaPredicted RBP10.61□□□□□ -0.71
NEK4-204ENST00000487068 RING1Q06587 406 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 NNTQ13423 1086 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 DMC1Q14565 340 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 ZNF528Q3MIS6 628 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 MPPE1Q53F39 396 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 ADGRF1Q5T601 910 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 SFMBT2Q5VUG0 894 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 RFWD3Q6PCD5 774 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 SND1Q7KZF4 910 aaKnown RBP eCLIP10.61□□□□□ -0.71
NEK4-204ENST00000487068 PHLDB2Q86SQ0 1253 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 XYLT1Q86Y38 959 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 SFTPA1Q8IWL2 248 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 ZNF397Q8NF99 534 aaPredicted RBP10.61□□□□□ -0.71
NEK4-204ENST00000487068 SLC30A5Q8TAD4 765 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 EZH1Q92800 747 aaPredicted RBP10.61□□□□□ -0.71
NEK4-204ENST00000487068 FCRL2Q96LA5 508 aaPredicted RBP10.61□□□□□ -0.71
NEK4-204ENST00000487068 SLC2A13Q96QE2 648 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 AGPAT1Q99943 283 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 CIPCQ9C0C6 399 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 DLL3Q9NYJ7 618 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.61□□□□□ -0.71
NEK4-204ENST00000487068 STIM2Q9P246 746 aa10.61□□□□□ -0.71
NEK4-204ENST00000487068 EP300Q09472 2414 aaPredicted RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 TP53BP1Q12888 1972 aaPredicted RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 GOLGA6L7A0A1B0GV03 622 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 TMCO5BA8MYB1 307 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 CHURC1-FNTBB4DL54 471 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 F5H5T6 163 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 K7EQS6 105 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 CBFA2T2O43439 604 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 PENKP01210 267 aaPredicted RBP10.6□□□□□ -0.71
NEK4-204ENST00000487068 CALB1P05937 261 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 SLC2A3P11169 496 aa10.6□□□□□ -0.71
NEK4-204ENST00000487068 DESP17661 470 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms