RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 IRF9Q00978 393 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 SLC10A2Q12908 348 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-211ENST00000486901 CNGA3Q16281 694 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 MAP1SQ66K74 1059 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-211ENST00000486901 SGF29Q96ES7 293 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 LENG8Q96PV6 779 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-211ENST00000486901 PORCNQ9H237 461 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 R3HDMLQ9H3Y0 253 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 COL24A1Q17RW2 1714 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 AHDC1Q5TGY3 1603 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-211ENST00000486901 ABLIM1O14639 778 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 ALDOAP04075 364 aaKnown RBP12.76□□□□□ -0.37
HSPG2-211ENST00000486901 OATP04181 439 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 CHRNGP07510 517 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 UQCRBP14927 111 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 ITGAXP20702 1163 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 PCSK6P29122 969 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 ZNF132P52740 706 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 YWHAEP62258 255 aaKnown RBP12.76□□□□□ -0.37
HSPG2-211ENST00000486901 NOMO1Q15155 1222 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 LAYNQ6UX15 382 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 ABHD15Q6UXT9 468 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 AMIGO2Q86SJ2 522 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 CPB2Q96IY4 423 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 CDRT15Q96T59 188 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 MMADHCQ9H3L0 296 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-211ENST00000486901 SIRPGQ9P1W8 387 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 KCNK1O00180 336 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 WNT10BO00744 389 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 LY6KQ17RY6 165 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 NADK2Q4G0N4 442 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 ANGEL2Q5VTE6 544 aaKnown RBP12.76□□□□□ -0.37
HSPG2-211ENST00000486901 KCNT2Q6UVM3 1135 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 RNF157Q96PX1 679 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 PDLIM7Q9NR12 457 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 THAP1Q9NVV9 213 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 TXNDC16Q9P2K2 825 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 EMCNQ9ULC0 261 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 LZTS1Q9Y250 596 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 ANKRD12Q6UB98 2062 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 APOL1O14791 398 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 HSPA4LO95757 839 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 PRKCBP05771 671 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 SUPT20HL2P0C7V6 817 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 TPH1P17752 444 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 ETFBP38117 255 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 SUPT20HL1Q3ZLR7 823 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 STYK1Q6J9G0 422 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 SNX32Q86XE0 403 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 ACVR1CQ8NER5 493 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 NSUN6Q8TEA1 469 aaKnown RBP12.75□□□□□ -0.37
HSPG2-211ENST00000486901 C7orf26Q96N11 449 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 CXCL16Q9H2A7 254 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 RSAD1Q9HA92 442 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 SSU72Q9NP77 194 aaKnown RBP12.75□□□□□ -0.37
HSPG2-211ENST00000486901 ATP9BO43861 1147 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 TNNC2P02585 160 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 C1QAP02745 245 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 FGF3P11487 239 aaPredicted RBP12.75□□□□□ -0.37
HSPG2-211ENST00000486901 EIF4BP23588 611 aaKnown RBP12.75□□□□□ -0.37
HSPG2-211ENST00000486901 ALDH1A3P47895 512 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 SLFN12LQ6IEE8 588 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 RSBN1LQ6PCB5 846 aaPredicted RBP12.75□□□□□ -0.37
HSPG2-211ENST00000486901 TMC7Q7Z402 723 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 KDELC2Q7Z4H8 507 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 NME8Q8N427 588 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 CATSPER2Q96P56 530 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 NR1H4Q96RI1 486 aaPredicted RBP12.75□□□□□ -0.37
HSPG2-211ENST00000486901 AGAP2Q99490 1192 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 SNRNP25Q9BV90 132 aaKnown RBP12.75□□□□□ -0.37
HSPG2-211ENST00000486901 NUF2Q9BZD4 464 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 COG4Q9H9E3 785 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 XPNPEP3Q9NQH7 507 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 H3BSA7 217 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 PAPSS1O43252 624 aaPredicted RBP12.75□□□□□ -0.37
HSPG2-211ENST00000486901 CLPTM1O96005 669 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 MAPK10P53779 464 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 PTPN11Q06124 597 aaPredicted RBP12.75□□□□□ -0.37
HSPG2-211ENST00000486901 NAPRTQ6XQN6 538 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 RPS27LQ71UM5 84 aaKnown RBP12.75□□□□□ -0.37
HSPG2-211ENST00000486901 ACOT1Q86TX2 421 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 BRSK2Q8IWQ3 736 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 METTL25Q8N6Q8 603 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 ZFAND2BQ8WV99 257 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 MINDY3Q9H8M7 445 aa12.75□□□□□ -0.37
HSPG2-211ENST00000486901 RPL26L1Q9UNX3 145 aaKnown RBP12.75□□□□□ -0.37
HSPG2-211ENST00000486901 F8W8V4 182 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 LTFP02788 710 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 XRCC1P18887 633 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-211ENST00000486901 HDCP19113 662 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 GPD1P21695 349 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 IL4RP24394 825 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 PDCD2Q16342 344 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-211ENST00000486901 NBPF12Q5TAG4 269 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-211ENST00000486901 FAM131BQ86XD5 332 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 NIM1KQ8IY84 436 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 CPNE9Q8IYJ1 553 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 DRAXINQ8NBI3 349 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-211ENST00000486901 SLC4A11Q8NBS3 891 aa12.74□□□□□ -0.37
HSPG2-211ENST00000486901 TTC16Q8NEE8 873 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms