RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 DDIT4Q9NX09 232 aa18.92■□□□□ 0.62
COL1A1-207ENST00000486572 K7ESF4 209 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 GFRA2O00451 464 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 TSPAN3O60637 253 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 MOCS2O96007 188 aaPredicted RBP18.91■□□□□ 0.62
COL1A1-207ENST00000486572 UNGP13051 313 aaPredicted RBP18.91■□□□□ 0.62
COL1A1-207ENST00000486572 PBX1P40424 430 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 MATKP42679 507 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 NSFP46459 744 aaKnown RBP18.91■□□□□ 0.62
COL1A1-207ENST00000486572 NRLP54845 237 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 RNASE9P60153 205 aaKnown RBP18.91■□□□□ 0.62
COL1A1-207ENST00000486572 MRPS21P82921 87 aaKnown RBP18.91■□□□□ 0.62
COL1A1-207ENST00000486572 CENPCQ03188 943 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 EIF4EBP2Q13542 120 aaPredicted RBP18.91■□□□□ 0.62
COL1A1-207ENST00000486572 CLEC16AQ2KHT3 1053 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 FAM133BQ5BKY9 247 aaKnown RBP18.91■□□□□ 0.62
COL1A1-207ENST00000486572 ZC3H12AQ5D1E8 599 aaKnown RBP18.91■□□□□ 0.62
COL1A1-207ENST00000486572 SYT13Q7L8C5 426 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 IRF2BP2Q7Z5L9 587 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 SLC30A5Q8TAD4 765 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 PHOX2BQ99453 314 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 DDX50Q9BQ39 737 aaKnown RBP18.91■□□□□ 0.62
COL1A1-207ENST00000486572 NUP58Q9BVL2 599 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 IRX2Q9BZI1 471 aaPredicted RBP18.91■□□□□ 0.62
COL1A1-207ENST00000486572 SEPT11Q9NVA2 429 aaKnown RBP18.91■□□□□ 0.62
COL1A1-207ENST00000486572 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.91■□□□□ 0.62
COL1A1-207ENST00000486572 ZSCAN32Q9NX65 697 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 RRN3Q9NYV6 651 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.91■□□□□ 0.62
COL1A1-207ENST00000486572 IFNKQ9P0W0 207 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 FBXO10Q9UK96 956 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 STAP1Q9ULZ2 295 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 SLC8A2Q9UPR5 921 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 PCDHGA2Q9Y5H1 932 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 R4GN57 208 aa18.91■□□□□ 0.62
COL1A1-207ENST00000486572 SYNJ2BP-COX16A0A087WUM0 186 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 GOLGA8SH3BPF8 625 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 TPM3P06753 285 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 CISD3P0C7P0 127 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 SLC2A3P11169 496 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 CHRM1P11229 460 aaPredicted RBP18.9■□□□□ 0.62
COL1A1-207ENST00000486572 HOXD9P28356 352 aaPredicted RBP18.9■□□□□ 0.62
COL1A1-207ENST00000486572 SLC6A4P31645 630 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 KIR2DL1P43626 348 aaPredicted RBP18.9■□□□□ 0.62
COL1A1-207ENST00000486572 ASIC2Q16515 512 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 SFMBT2Q5VUG0 894 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 NADSYN1Q6IA69 706 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 ZBTB44Q8NCP5 570 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 TMA16Q96EY4 203 aaKnown RBP18.9■□□□□ 0.62
COL1A1-207ENST00000486572 C11orf70Q9BRQ4 267 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 SLC2A11Q9BYW1 496 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 COX16Q9P0S2 106 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 SLC27A6Q9Y2P4 619 aa18.9■□□□□ 0.62
COL1A1-207ENST00000486572 GOLGA6L7A0A1B0GV03 622 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 ANTXRLA6NF34 631 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 PROB1E7EW31 1015 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 HOXA6P31267 233 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 CCR1P32246 355 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 TIE1P35590 1138 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 NME3Q13232 169 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 DMC1Q14565 340 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 HSF5Q4G112 596 aaPredicted RBP18.89■□□□□ 0.61
COL1A1-207ENST00000486572 PIK3R6Q5UE93 754 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 RFWD3Q6PCD5 774 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 PHF13Q86YI8 300 aaPredicted RBP18.89■□□□□ 0.61
COL1A1-207ENST00000486572 ALLCQ8N6M5 410 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 ATP6V0D2Q8N8Y2 350 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 KCNV2Q8TDN2 545 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 ATRIPQ8WXE1 791 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 RNF34Q969K3 372 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 IQCDQ96DY2 449 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 BTN2A3PQ96KV6 586 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 NPY6RQ99463 290 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 SYT11Q9BT88 431 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 AIPL1Q9NZN9 384 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 TMEM59LQ9UK28 342 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 MMP17Q9ULZ9 603 aa18.89■□□□□ 0.61
COL1A1-207ENST00000486572 A0A1W2PQJ5 194 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 TYW5A2RUC4 315 aaKnown RBP18.88■□□□□ 0.61
COL1A1-207ENST00000486572 M0QYT0 321 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 KLF8O95600 359 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-207ENST00000486572 ABCB4P21439 1286 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 FLT3P36888 993 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 SULT1E1P49888 294 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 SGSHP51688 502 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 MTA1Q13330 715 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 MPP7Q5T2T1 576 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 EMC10Q5UCC4 262 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 OTUD1Q5VV17 481 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-207ENST00000486572 E4F1Q66K89 784 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-207ENST00000486572 ARCQ7LC44 396 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 TRMT11Q7Z4G4 463 aaKnown RBP18.88■□□□□ 0.61
COL1A1-207ENST00000486572 CCDC33Q8N5R6 958 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 CAMKK1Q8N5S9 505 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 ZNF513Q8N8E2 541 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-207ENST00000486572 IL17RCQ8NAC3 791 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 HJURPQ8NCD3 748 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-207ENST00000486572 RNF214Q8ND24 703 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 NT5C3BQ969T7 300 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 PRICKLE1Q96MT3 831 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms