RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 RNF40O75150 1001 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 EFEMP2O95967 443 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 IGLV3-25P01717 112 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 PECAM1P16284 738 aaPredicted RBP12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 PBX3P40426 434 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 YWHAGP61981 247 aaKnown RBP eCLIP12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 RPL10AP62906 217 aaKnown RBP12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 GPS1Q13098 491 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 NME3Q13232 169 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 UAP1Q16222 522 aaPredicted RBP12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 ACBD5Q5T8D3 534 aaPredicted RBP12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 BTBD8Q5XKL5 378 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 DENND2CQ68D51 928 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 DARS2Q6PI48 645 aaKnown RBP12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 CEP57Q86XR8 500 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 PPIL6Q8IXY8 311 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 RNF139Q8WU17 664 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 NDRG1Q92597 394 aaKnown RBP12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 FAM118BQ9BPY3 351 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 TMEM109Q9BVC6 243 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 RHOBTB2Q9BYZ6 727 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 FRMD8Q9BZ67 464 aaPredicted RBP12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 BRD8Q9H0E9 1235 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 OSBPL2Q9H1P3 480 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 SMOC2Q9H3U7 446 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 WDCPQ9H6R7 721 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 FAM204AQ9H8W3 233 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 CERS4Q9HA82 394 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 PIGVQ9NUD9 493 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 DDIT4Q9NX09 232 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 ABI2Q9NYB9 513 aaPredicted RBP12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 CWC15Q9P013 229 aaKnown RBP12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 PAK5Q9P286 719 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 NFS1Q9Y697 457 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 PATJQ8NI35 1801 aa12.22□□□□□ -0.45
ERGIC3-215ENST00000486268 VWA8A3KMH1 1905 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 PTPRDP23468 1912 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 A6NNZ2 444 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 HMGB1P1B2RPK0 211 aaPredicted RBP12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 H7C0C1 242 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 EEF2KO00418 725 aaKnown RBP12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 IFNB1P01574 187 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 MYZAPP0CAP1 466 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 SLC2A3P11169 496 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 CPB1P15086 417 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 ATP5OP48047 213 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 ATXN1P54253 815 aaKnown RBP12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 ERVK-21P61565 698 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 CBLBQ13191 982 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 SEMA3BQ13214 749 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 EIF4EBP2Q13542 120 aaPredicted RBP12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 PPP2R5DQ14738 602 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 PAFAH1B3Q15102 231 aaKnown RBP12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 TUBB8Q3ZCM7 444 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 SLC8B1Q6J4K2 584 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 MSANTD2Q6P1R3 559 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 PPP1R21Q6ZMI0 780 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 TMEM173Q86WV6 379 aaPredicted RBP12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 SCN4BQ8IWT1 228 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 GPR65Q8IYL9 337 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 RNF168Q8IYW5 571 aaPredicted RBP12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 COLGALT1Q8NBJ5 622 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 DQX1Q8TE96 717 aaKnown RBP12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 IGSF21Q96ID5 467 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 TTC25Q96NG3 672 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 HAPLN3Q96S86 360 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 EPAS1Q99814 870 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 ROPN1BQ9BZX4 212 aaPredicted RBP12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 ADAM7Q9H2U9 754 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 SLC28A3Q9HAS3 691 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 ROPN1Q9HAT0 212 aaPredicted RBP12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 OLA1Q9NTK5 396 aaKnown RBP12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 CLIC5Q9NZA1 410 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 CALCOCO1Q9P1Z2 691 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 MTRRQ9UBK8 725 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 MAFFQ9ULX9 164 aa12.21□□□□□ -0.45
ERGIC3-215ENST00000486268 TRANK1O15050 2925 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 MTMR11A4FU01 709 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 NT5C1B-RDH14C9J2C7 533 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 C5orf67F2Z3F1 127 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 IRAK2O43187 625 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 RIPK2O43353 540 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 OR4Q2P0C623 313 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 HAPLN1P10915 354 aaPredicted RBP12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 GOT1P17174 413 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 LAG3P18627 525 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 YWHAQP27348 245 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 RPL22P35268 128 aaKnown RBP12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 BMPR1AP36894 532 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 TUFMP49411 452 aaKnown RBP12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 NRG1Q02297 640 aaPredicted RBP12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 IFFO1Q0D2I5 559 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 DPYSQ14117 519 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 PDK1Q15118 436 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 SLC45A4Q5BKX6 768 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 CEP85LQ5SZL2 805 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 RNASEH2BQ5TBB1 312 aaKnown RBP12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 AGBL2Q5U5Z8 902 aa12.2□□□□□ -0.46
ERGIC3-215ENST00000486268 C1orf228Q6PIY5 440 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms