RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SERPINB6P35237 376 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 PITX1P78337 314 aaPredicted RBP12.36□□□□□ -0.43
PKP4-213ENST00000486254 NRG1Q02297 640 aaPredicted RBP12.36□□□□□ -0.43
PKP4-213ENST00000486254 FNBP1LQ5T0N5 605 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 ADGRD1Q6QNK2 874 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 ARHGEF18Q6ZSZ5 1173 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 MICALCLQ6ZW33 695 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 YTHDF3Q7Z739 585 aaKnown RBP12.36□□□□□ -0.43
PKP4-213ENST00000486254 SPATA2LQ8IUW3 424 aaPredicted RBP12.36□□□□□ -0.43
PKP4-213ENST00000486254 CCDC13Q8IYE1 715 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 FBXO36Q8NEA4 188 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 UHMK1Q8TAS1 419 aaKnown RBP12.36□□□□□ -0.43
PKP4-213ENST00000486254 ZNF473Q8WTR7 871 aaKnown RBP12.36□□□□□ -0.43
PKP4-213ENST00000486254 CHMP6Q96FZ7 201 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 C8orf48Q96LL4 319 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 CYTH2Q99418 400 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 EPAS1Q99814 870 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 SELENOSQ9BQE4 189 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 SMOC2Q9H3U7 446 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 ABCC13Q9NSE7 274 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 DDIT4Q9NX09 232 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 FNIP2Q9P278 1114 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 RABGEF1Q9UJ41 708 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.36□□□□□ -0.43
PKP4-213ENST00000486254 TCRBV7S3A2A0A539 114 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 TMEM120BA0PK00 339 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 OR6C75A6NL08 312 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 MFSD11O43934 449 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 AMPD1P23109 780 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 BDNFP23560 247 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 HOXC13P31276 330 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 SARNPP82979 210 aaKnown RBP12.35□□□□□ -0.43
PKP4-213ENST00000486254 ELAVL2Q12926 359 aaKnown RBP12.35□□□□□ -0.43
PKP4-213ENST00000486254 MRPL58Q14197 206 aaKnown RBP12.35□□□□□ -0.43
PKP4-213ENST00000486254 MSS51Q4VC12 460 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 BSPRYQ5W0U4 402 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 MSANTD2Q6P1R3 559 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 ZNF449Q6P9G9 518 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 LRRTM3Q86VH5 581 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 CCNJLQ8IV13 435 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 ARHGAP18Q8N392 663 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 ALKBH8Q96BT7 664 aaKnown RBP12.35□□□□□ -0.43
PKP4-213ENST00000486254 HDAC11Q96DB2 347 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 CEP295NLQ96MC4 621 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 VAT1Q99536 393 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 MRPL9Q9BYD2 267 aaKnown RBP12.35□□□□□ -0.43
PKP4-213ENST00000486254 C10orf88Q9H8K7 445 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 PAK6Q9NQU5 681 aaPredicted RBP12.35□□□□□ -0.43
PKP4-213ENST00000486254 TMLHEQ9NVH6 421 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 ARHGEF38Q9NXL2 777 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 IGSF9Q9P2J2 1179 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 VWA8A3KMH1 1905 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 FAM92AA1XBS5 289 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 ERI2A8K979 691 aaKnown RBP12.35□□□□□ -0.43
PKP4-213ENST00000486254 RASA4BC9J798 803 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 I3L4J1 428 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 TRIM66O15016 1216 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 IRAK2O43187 625 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 RASA4O43374 803 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 DDHD2O94830 711 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 ITGB1P05556 798 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 BRAFP15056 766 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 TPI1P60174 286 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 PPIDQ08752 370 aaKnown RBP12.35□□□□□ -0.43
PKP4-213ENST00000486254 NME3Q13232 169 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 PPP2R5DQ14738 602 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 BBS9Q3SYG4 887 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 ACBD5Q5T8D3 534 aaPredicted RBP12.35□□□□□ -0.43
PKP4-213ENST00000486254 TTC19Q6DKK2 380 aaPredicted RBP12.35□□□□□ -0.43
PKP4-213ENST00000486254 C3orf62Q6ZUJ4 267 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 PALM2Q8IXS6 379 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 CRIPAKQ8N1N5 446 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 PYROXD2Q8N2H3 581 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 DQX1Q8TE96 717 aaKnown RBP12.35□□□□□ -0.43
PKP4-213ENST00000486254 NDRG1Q92597 394 aaKnown RBP12.35□□□□□ -0.43
PKP4-213ENST00000486254 SEPT8Q92599 483 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 HAPLN3Q96S86 360 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 TMEM175Q9BSA9 504 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 NAT9Q9BTE0 207 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 NSRP1Q9H0G5 558 aaKnown RBP12.35□□□□□ -0.43
PKP4-213ENST00000486254 FBXO44Q9H4M3 255 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 ETNK1Q9HBU6 452 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 COMMD8Q9NX08 183 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.35□□□□□ -0.43
PKP4-213ENST00000486254 IL37Q9NZH6 218 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 CTNNAL1Q9UBT7 734 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 ZNF180Q9UJW8 692 aa12.35□□□□□ -0.43
PKP4-213ENST00000486254 FAM47DPA6NHR8 397 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 GOLGA8MH3BSY2 632 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 VAV1P15498 845 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 PRKCHP24723 683 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 ELK3P41970 407 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 CCT5P48643 541 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 SLC5A3P53794 718 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 GALNT2Q10471 571 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 MTA1Q13330 715 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 PARP6Q2NL67 630 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 ANKRD20A2Q5SQ80 823 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 ANKRD20A1Q5TYW2 823 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 ANKRD20A3Q5VUR7 823 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms