RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 MAATS1Q7Z4T9 603 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 TMEM150AQ86TG1 271 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 PDZD8Q8NEN9 1154 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.94□□□□□ -0.02
COL9A1-207ENST00000486080 SLC22A17Q8WUG5 538 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 SLC39A13Q96H72 371 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 FCRL2Q96LA5 508 aaPredicted RBP14.94□□□□□ -0.02
COL9A1-207ENST00000486080 SAMD11Q96NU1 681 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 OLA1Q9NTK5 396 aaKnown RBP14.94□□□□□ -0.02
COL9A1-207ENST00000486080 TRPM5Q9NZQ8 1165 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 XPO7Q9UIA9 1087 aaKnown RBP14.94□□□□□ -0.02
COL9A1-207ENST00000486080 SLC12A8A0AV02 714 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 KCNU1A8MYU2 1149 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 ZNF487B1APH4 448 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 APOC4-APOC2K7ER74 178 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 APOL1O14791 398 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 LPXNO60711 386 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 CLASP2O75122 1294 aaKnown RBP14.94□□□□□ -0.02
COL9A1-207ENST00000486080 PAGE1O75459 146 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 MOCS2O96007 188 aaPredicted RBP14.94□□□□□ -0.02
COL9A1-207ENST00000486080 APOC2P02655 101 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 HMBSP08397 361 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 ARL4AP40617 200 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 BRMS1LQ5PSV4 323 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 CCDC149Q6ZUS6 474 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 JAMLQ86YT9 394 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 HS6ST3Q8IZP7 471 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 ARNTL2Q8WYA1 636 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 ANKRD7Q92527 254 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 SIK2Q9H0K1 926 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 C10orf88Q9H8K7 445 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 EPB41L5Q9HCM4 733 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 ARHGEF4Q9NR80 690 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 HOMER3Q9NSC5 361 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 OR12D3Q9UGF7 316 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 RAB21Q9UL25 225 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 C2orf78A6NCI8 922 aa14.93□□□□□ -0.02
COL9A1-207ENST00000486080 H3BRJ5 948 aa14.93□□□□□ -0.02
COL9A1-207ENST00000486080 EEF2KO00418 725 aaKnown RBP14.93□□□□□ -0.02
COL9A1-207ENST00000486080 PER2O15055 1255 aa14.93□□□□□ -0.02
COL9A1-207ENST00000486080 LRG1P02750 347 aa14.93□□□□□ -0.02
COL9A1-207ENST00000486080 EPCAMP16422 314 aa14.93□□□□□ -0.02
COL9A1-207ENST00000486080 BYSLQ13895 437 aaKnown RBP14.93□□□□□ -0.02
COL9A1-207ENST00000486080 DHX34Q14147 1143 aaKnown RBP14.93□□□□□ -0.02
COL9A1-207ENST00000486080 TRIP4Q15650 581 aaPredicted RBP14.93□□□□□ -0.02
COL9A1-207ENST00000486080 HECTD3Q5T447 861 aa14.93□□□□□ -0.02
COL9A1-207ENST00000486080 RFX8Q6ZV50 586 aa14.93□□□□□ -0.02
COL9A1-207ENST00000486080 B4GALNT4Q76KP1 1039 aa14.93□□□□□ -0.02
COL9A1-207ENST00000486080 ITIH5Q86UX2 942 aa14.93□□□□□ -0.02
COL9A1-207ENST00000486080 SLC35B2Q8TB61 432 aa14.93□□□□□ -0.02
COL9A1-207ENST00000486080 IL21Q9HBE4 155 aa14.93□□□□□ -0.02
COL9A1-207ENST00000486080 RCOR3Q9P2K3 495 aaPredicted RBP14.93□□□□□ -0.02
COL9A1-207ENST00000486080 MSRAQ9UJ68 235 aa14.93□□□□□ -0.02
COL9A1-207ENST00000486080 MYO9BQ13459 2157 aa14.93□□□□□ -0.02
COL9A1-207ENST00000486080 EPOPA6NHQ4 379 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 CCL16O15467 120 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 COCHO43405 550 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 RFPL2O75678 378 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 MAP3K6O95382 1288 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 F11P03951 625 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 MYBL2P10244 700 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 ATP5C1P36542 298 aaKnown RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 VCPP55072 806 aaKnown RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 DPYSQ14117 519 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 PPP2R2DQ66LE6 453 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 WDR93Q6P2C0 686 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 FBXO38Q6PIJ6 1188 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 RBM23Q86U06 439 aaKnown RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 DDX42Q86XP3 938 aaKnown RBP eCLIP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 ZNF276Q8N554 614 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 TTC13Q8NBP0 860 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 ATL2Q8NHH9 583 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 CASKIN2Q8WXE0 1202 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 CCDC114Q96M63 670 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 HAPLN3Q96S86 360 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 LRRC3Q9BY71 257 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 TRIM31Q9BZY9 425 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 RNF38Q9H0F5 515 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 OSBPL2Q9H1P3 480 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 GDF3Q9NR23 364 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 MAN1C1Q9NR34 630 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 ASB3Q9Y575 518 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 HEY1Q9Y5J3 304 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 CDH23Q9H251 3354 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 BHMG1C9JSJ3 638 aaPredicted RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 NRG2O14511 850 aaPredicted RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 LRIG2O94898 1065 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 ECEL1O95672 775 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 IGLV3-27P01718 113 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 SRGAP2BP0DMP2 458 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 H2AFXP16104 143 aaPredicted RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 TGM2P21980 687 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 KCNQ1P51787 676 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 TPI1P60174 286 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 GBE1Q04446 702 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 SLC10A2Q12908 348 aaPredicted RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 NNTQ13423 1086 aa14.92□□□□□ -0.02
COL9A1-207ENST00000486080 TRIP13Q15645 432 aaPredicted RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 OASLQ15646 514 aaKnown RBP14.92□□□□□ -0.02
COL9A1-207ENST00000486080 PPM1LQ5SGD2 360 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms