RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 RAD9BQ6WBX8 426 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 CIR1Q86X95 450 aaPredicted RBP12.34□□□□□ -0.43
APTX-227ENST00000485479 TMEM139Q8IV31 216 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 CFAP52Q8N1V2 620 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 FAM172AQ8WUF8 416 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 PLD4Q96BZ4 506 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 SLC39A13Q96H72 371 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 DDX23Q9BUQ8 820 aaKnown RBP12.34□□□□□ -0.43
APTX-227ENST00000485479 OSGEPQ9NPF4 335 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 ZDHHC4Q9NPG8 344 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 SPHK2Q9NRA0 654 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 RBM12Q9NTZ6 932 aaKnown RBP12.34□□□□□ -0.43
APTX-227ENST00000485479 CLEC4EQ9ULY5 219 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 STAP1Q9ULZ2 295 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 HBS1LQ9Y450 684 aaKnown RBP12.34□□□□□ -0.43
APTX-227ENST00000485479 A0A0U1RQJ8 604 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 SPECC1L-ADORA2AF8WAN1 911 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 ALADP13716 330 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 GPD1P21695 349 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 SDC4P31431 198 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 IRAK1P51617 712 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 GSCP56915 257 aaPredicted RBP12.34□□□□□ -0.43
APTX-227ENST00000485479 KDSRQ06136 332 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 UBXN2BQ14CS0 331 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 FAM133BQ5BKY9 247 aaKnown RBP12.34□□□□□ -0.43
APTX-227ENST00000485479 RAP1GAP2Q684P5 730 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 PLEKHA7Q6IQ23 1121 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.34□□□□□ -0.43
APTX-227ENST00000485479 ACRBPQ8NEB7 543 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 ATRIPQ8WXE1 791 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 DESI2Q9BSY9 194 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 NUP85Q9BW27 656 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 TKTL2Q9H0I9 626 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 SIK2Q9H0K1 926 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 TBC1D17Q9HA65 648 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 PARVAQ9NVD7 372 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 WDR35Q9P2L0 1181 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 TMEM221A6NGB7 291 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 M0R296 226 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 PI15O43692 258 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 NFATC1O95644 943 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 ADH5P11766 374 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 TCF4P15884 667 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 SCNN1AP37088 669 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 HDAC4P56524 1084 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 PFKPQ01813 784 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 PDGFRLQ15198 375 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 PIK3R6Q5UE93 754 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 BEND5Q7L4P6 421 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 CCDC185Q8N715 623 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 NT5C3BQ969T7 300 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 PRICKLE1Q96MT3 831 aaPredicted RBP12.33□□□□□ -0.44
APTX-227ENST00000485479 PANX2Q96RD6 677 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 BAG1Q99933 345 aaPredicted RBP12.33□□□□□ -0.44
APTX-227ENST00000485479 TRIM62Q9BVG3 475 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 BBS2Q9BXC9 721 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 MFSD1Q9H3U5 465 aa12.33□□□□□ -0.44
APTX-227ENST00000485479 ZDBF2Q9HCK1 2354 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 APOEP02649 317 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 DCNP07585 359 aaKnown RBP12.32□□□□□ -0.44
APTX-227ENST00000485479 TYRP14679 529 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 PSMA2P25787 234 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 TARSP26639 723 aaKnown RBP12.32□□□□□ -0.44
APTX-227ENST00000485479 RPS24P62847 133 aaKnown RBP12.32□□□□□ -0.44
APTX-227ENST00000485479 GSE1Q14687 1217 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 NUGGCQ68CJ6 796 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 CWF19L1Q69YN2 538 aaKnown RBP12.32□□□□□ -0.44
APTX-227ENST00000485479 SCYL2Q6P3W7 929 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 CPA6Q8N4T0 437 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 DNASE1L2Q92874 299 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 ERLEC1Q96DZ1 483 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 WDCPQ9H6R7 721 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 STIM2Q9P246 746 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 TBC1D14Q9P2M4 693 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 WNT16Q9UBV4 365 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 ANAPC7Q9UJX3 599 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 TMEM191CA6NGB0 347 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 SLC9A3R1O14745 358 aaPredicted RBP12.32□□□□□ -0.44
APTX-227ENST00000485479 ACSL4O60488 711 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 PAGE1O75459 146 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 CCR1P32246 355 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 GBP1P32455 592 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 RDXP35241 583 aaKnown RBP12.32□□□□□ -0.44
APTX-227ENST00000485479 OPRD1P41143 372 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 RING1Q06587 406 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 MS4A13Q5J8X5 152 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 CHSY1Q86X52 802 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 PYROXD2Q8N2H3 581 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 ARFGAP1Q8N6T3 406 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 WFDC5Q8TCV5 224 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 DDI1Q8WTU0 396 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 FAM3CQ92520 227 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 VCPIP1Q96JH7 1222 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 POLR3BQ9NW08 1133 aaPredicted RBP12.32□□□□□ -0.44
APTX-227ENST00000485479 GPATCH2LQ9NWQ4 482 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 CTTNBP2NLQ9P2B4 639 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 IMPACTQ9P2X3 320 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 PCSK1NQ9UHG2 260 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 VANGL2Q9ULK5 521 aa12.32□□□□□ -0.44
APTX-227ENST00000485479 REXO2Q9Y3B8 237 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms