RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 ARL4CP56559 192 aa7.54□□□□□ -1.2
UBR3-210ENST00000484596 RNASE12Q5GAN4 147 aaKnown RBP7.54□□□□□ -1.2
UBR3-210ENST00000484596 ZNF569Q5MCW4 686 aa7.54□□□□□ -1.2
UBR3-210ENST00000484596 LIN54Q6MZP7 749 aa7.54□□□□□ -1.2
UBR3-210ENST00000484596 NAPRTQ6XQN6 538 aa7.54□□□□□ -1.2
UBR3-210ENST00000484596 TRIM72Q6ZMU5 477 aa7.54□□□□□ -1.2
UBR3-210ENST00000484596 SRRM1Q8IYB3 904 aaKnown RBP7.54□□□□□ -1.2
UBR3-210ENST00000484596 DDX23Q9BUQ8 820 aaKnown RBP7.54□□□□□ -1.2
UBR3-210ENST00000484596 USP29Q9HBJ7 922 aa7.54□□□□□ -1.2
UBR3-210ENST00000484596 GAR1Q9NY12 217 aaKnown RBP7.54□□□□□ -1.2
UBR3-210ENST00000484596 ASAP1Q9ULH1 1129 aa7.54□□□□□ -1.2
UBR3-210ENST00000484596 WNT6Q9Y6F9 365 aa7.54□□□□□ -1.2
UBR3-210ENST00000484596 ZNF213O14771 459 aa7.53□□□□□ -1.2
UBR3-210ENST00000484596 CA12O43570 354 aa7.53□□□□□ -1.2
UBR3-210ENST00000484596 GYS1P13807 737 aa7.53□□□□□ -1.2
UBR3-210ENST00000484596 CST5P28325 142 aaPredicted RBP7.53□□□□□ -1.2
UBR3-210ENST00000484596 IGHMBP2P38935 993 aaKnown RBP7.53□□□□□ -1.2
UBR3-210ENST00000484596 CYP4F2P78329 520 aa7.53□□□□□ -1.2
UBR3-210ENST00000484596 POSTNQ15063 836 aa7.53□□□□□ -1.2
UBR3-210ENST00000484596 ANKRD18AQ8IVF6 992 aa7.53□□□□□ -1.2
UBR3-210ENST00000484596 CPT1BQ92523 772 aa7.53□□□□□ -1.2
UBR3-210ENST00000484596 FYTTD1Q96QD9 318 aaKnown RBP7.53□□□□□ -1.2
UBR3-210ENST00000484596 MMS19Q96T76 1030 aa7.53□□□□□ -1.2
UBR3-210ENST00000484596 BRD8Q9H0E9 1235 aa7.53□□□□□ -1.2
UBR3-210ENST00000484596 TERF2IPQ9NYB0 399 aa7.53□□□□□ -1.2
UBR3-210ENST00000484596 KIF17Q9P2E2 1029 aa7.53□□□□□ -1.2
UBR3-210ENST00000484596 PGAP2Q9UHJ9 254 aa7.53□□□□□ -1.2
UBR3-210ENST00000484596 ADAM21Q9UKJ8 722 aa7.53□□□□□ -1.2
UBR3-210ENST00000484596 C19orf53Q9UNZ5 99 aaPredicted RBP7.53□□□□□ -1.2
UBR3-210ENST00000484596 TARM1B6A8C7 271 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 BTBD19C9JJ37 291 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 IPO5O00410 1097 aaKnown RBP7.52□□□□□ -1.21
UBR3-210ENST00000484596 EXOC3O60645 756 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 RPP40O75818 363 aaKnown RBP7.52□□□□□ -1.21
UBR3-210ENST00000484596 CER1O95813 267 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 MT-CO3P00414 261 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 FPR3P25089 353 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 DUSP1P28562 367 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 COPB1P53618 953 aaKnown RBP7.52□□□□□ -1.21
UBR3-210ENST00000484596 LMOD3Q0VAK6 560 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 TIGD6Q17RP2 521 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 SUMO4Q6EEV6 95 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 JMJD6Q6NYC1 403 aaPredicted RBP7.52□□□□□ -1.21
UBR3-210ENST00000484596 ACSM6Q6P461 480 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 LVRNQ6Q4G3 990 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 AMIGO2Q86SJ2 522 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 LINC01465Q8N7H1 131 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 OR52L2PQ8NGH6 319 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 OR1N1Q8NGS0 311 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 OR6Y1Q8NGX8 325 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 SLC22A17Q8WUG5 538 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 GLMPQ8WWB7 406 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 SDCCAG3Q96C92 435 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 EDC3Q96F86 508 aaKnown RBP7.52□□□□□ -1.21
UBR3-210ENST00000484596 REXO5Q96IC2 774 aaKnown RBP7.52□□□□□ -1.21
UBR3-210ENST00000484596 HS6ST2Q96MM7 605 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 FAM167BQ9BTA0 163 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 SAP30LQ9HAJ7 183 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 KCNK9Q9NPC2 374 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 VPS45Q9NRW7 570 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 LIN7CQ9NUP9 197 aaKnown RBP7.52□□□□□ -1.21
UBR3-210ENST00000484596 FZD4Q9ULV1 537 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 CNTN6Q9UQ52 1028 aa7.52□□□□□ -1.21
UBR3-210ENST00000484596 HMX3A6NHT5 357 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 H3BNC9 293 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 INO80B-WBP1J3KQ70 363 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 GPC5P78333 572 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 RPS6KA2Q15349 733 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 FAM187BQ17R55 369 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 ADCK5Q3MIX3 580 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 BCDIN3DQ7Z5W3 292 aaKnown RBP7.51□□□□□ -1.21
UBR3-210ENST00000484596 SCAMP5Q8TAC9 235 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 ADAMTS18Q8TE60 1221 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 HMGB4Q8WW32 186 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 CCDC17Q96LX7 622 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 TBATAQ96M53 351 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 TRAPPC9Q96Q05 1148 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 RNF26Q9BY78 433 aaPredicted RBP7.51□□□□□ -1.21
UBR3-210ENST00000484596 CCDC134Q9H6E4 229 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 ELAC1Q9H777 363 aaKnown RBP7.51□□□□□ -1.21
UBR3-210ENST00000484596 MLXIPQ9HAP2 919 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 SEPSECSQ9HD40 501 aaKnown RBP7.51□□□□□ -1.21
UBR3-210ENST00000484596 NDUFAF4Q9P032 175 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 SRP68Q9UHB9 627 aaKnown RBP7.51□□□□□ -1.21
UBR3-210ENST00000484596 SPATA31A1Q5TZJ5 1347 aa7.51□□□□□ -1.21
UBR3-210ENST00000484596 FAM90A18PA6NE21 464 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 FAM90A16PA6NEW6 464 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 CGB1A6NKQ9 187 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 FAM90A9PA6NNJ1 464 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 FAM90A5PA8MXJ8 464 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 TTC34A8MYJ7 566 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 UBE2Q2LH0YL09 131 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 FAM90A15PP0C7V4 464 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 FAM90A14PP0C7W9 464 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 JAK3P52333 1124 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 PNLIPRP1P54315 467 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 SRSF4Q08170 494 aaKnown RBP7.5□□□□□ -1.21
UBR3-210ENST00000484596 SF3A3Q12874 501 aaKnown RBP eCLIP7.5□□□□□ -1.21
UBR3-210ENST00000484596 MAPRE1Q15691 268 aaKnown RBP7.5□□□□□ -1.21
UBR3-210ENST00000484596 BTBD16Q32M84 506 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms