RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 TNNT1P13805 278 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 ATF7P17544 494 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-214ENST00000483925 GGT5P36269 586 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 RPS19P39019 145 aaKnown RBP4.81□□□□□ -1.64
PTCD3-214ENST00000483925 ETV4P43268 484 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 ALDH1A3P47895 512 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 HARS2P49590 506 aaKnown RBP4.81□□□□□ -1.64
PTCD3-214ENST00000483925 CLCN2P51788 898 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 ZNF135P52742 658 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-214ENST00000483925 RAD23AP54725 363 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 DGCR2P98153 550 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 DUSP2Q05923 314 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 AIMP2Q13155 320 aaKnown RBP4.81□□□□□ -1.64
PTCD3-214ENST00000483925 CSHL1Q14406 222 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 CRYMQ14894 314 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 ZNF750Q32MQ0 723 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 MGAT5BQ3V5L5 792 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 GALNTL6Q49A17 601 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 PLA1AQ53H76 456 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 BMP2KLQ5H9B9 411 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 FAM160B1Q5W0V3 765 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 KAZNQ674X7 775 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 TMEM200BQ69YZ2 307 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 THNSL1Q8IYQ7 743 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 POMGNT2Q8NAT1 580 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 REPS2Q8NFH8 660 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 GDAP1Q8TB36 358 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 PIGOQ8TEQ8 1089 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 ZNF668Q96K58 619 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-214ENST00000483925 INTS2Q9H0H0 1204 aaKnown RBP4.81□□□□□ -1.64
PTCD3-214ENST00000483925 TAOK3Q9H2K8 898 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 CXorf56Q9H5V9 222 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 TAB2Q9NYJ8 693 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 ATP11BQ9Y2G3 1177 aa4.81□□□□□ -1.64
PTCD3-214ENST00000483925 KDM3AQ9Y4C1 1321 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 RTCAO00442 366 aaKnown RBP4.8□□□□□ -1.64
PTCD3-214ENST00000483925 KIAA0391O15091 583 aaKnown RBP4.8□□□□□ -1.64
PTCD3-214ENST00000483925 RRP9O43818 475 aaKnown RBP4.8□□□□□ -1.64
PTCD3-214ENST00000483925 TBX10O75333 385 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 GOSR1O95249 250 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 METTL18O95568 372 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 MT-ND3P03897 115 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 ATP5BP06576 529 aaKnown RBP4.8□□□□□ -1.64
PTCD3-214ENST00000483925 DESP17661 470 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 ATP5JP18859 108 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 SAT1P21673 171 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 SCP2P22307 547 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 GCH1P30793 250 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 RGS2P41220 211 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 ALDH3A2P51648 485 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 INHBEP58166 350 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 UBXN2AP68543 259 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 KRTAP1-1Q07627 177 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 NFYCQ13952 458 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 KCNAB1Q14722 419 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 PTPN14Q15678 1187 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 TBCCQ15814 346 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 C5orf22Q49AR2 442 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 FAM47AQ5JRC9 791 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 ZNF484Q5JVG2 852 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 ZNF569Q5MCW4 686 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 CBWD5Q5RIA9 395 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 MANEALQ5VSG8 457 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 CACHD1Q5VU97 1274 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 GARNL3Q5VVW2 1013 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 AFMIDQ63HM1 303 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 TATDN1Q6P1N9 297 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 DENND1BQ6P3S1 775 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 CNSTQ6PJW8 725 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 TRABD2AQ86V40 505 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 CEP97Q8IW35 865 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 LILRA3Q8N6C8 439 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-214ENST00000483925 TRIML1Q8N9V2 468 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 FBXO18Q8NFZ0 1043 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 GSDMBQ8TAX9 411 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 POMGNT1Q8WZA1 660 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 SAAL1Q96ER3 474 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 RBM17Q96I25 401 aaKnown RBP4.8□□□□□ -1.64
PTCD3-214ENST00000483925 GBP5Q96PP8 586 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 PLEKHG4BQ96PX9 1271 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 MESP1Q9BRJ9 268 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 PLA2G12BQ9BX93 195 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 TEX12Q9BXU0 123 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 SLC25A18Q9H1K4 315 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 MSL2Q9HCI7 577 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 PDE7BQ9NP56 450 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 EHD2Q9NZN4 543 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 MRPL15Q9P015 296 aaKnown RBP4.8□□□□□ -1.64
PTCD3-214ENST00000483925 CORO1CQ9ULV4 474 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-214ENST00000483925 FAM169AQ9Y6X4 670 aa4.8□□□□□ -1.64
PTCD3-214ENST00000483925 GAGE10A6NGK3 116 aa4.79□□□□□ -1.64
PTCD3-214ENST00000483925 NPIPB15A6NHN6 443 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-214ENST00000483925 MYO1GB0I1T2 1018 aa4.79□□□□□ -1.64
PTCD3-214ENST00000483925 TAF4O00268 1085 aa4.79□□□□□ -1.64
PTCD3-214ENST00000483925 MATN2O00339 956 aa4.79□□□□□ -1.64
PTCD3-214ENST00000483925 NRP1O14786 923 aa4.79□□□□□ -1.64
PTCD3-214ENST00000483925 RGS10O43665 173 aa4.79□□□□□ -1.64
PTCD3-214ENST00000483925 B3GALNT1O75752 331 aa4.79□□□□□ -1.64
PTCD3-214ENST00000483925 HAUS5O94927 633 aa4.79□□□□□ -1.64
PTCD3-214ENST00000483925 HMGCRP04035 888 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms