RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 PRKCIP41743 596 aa27.54■■■□□ 2
GTF3C4-202ENST00000483873 MATKP42679 507 aa27.54■■■□□ 2
GTF3C4-202ENST00000483873 SEC13P55735 322 aa27.54■■■□□ 2
GTF3C4-202ENST00000483873 SATB1Q01826 763 aa27.54■■■□□ 2
GTF3C4-202ENST00000483873 FAM133BQ5BKY9 247 aaKnown RBP27.54■■■□□ 2
GTF3C4-202ENST00000483873 ADGRF1Q5T601 910 aa27.54■■■□□ 2
GTF3C4-202ENST00000483873 SARM1Q6SZW1 724 aa27.54■■■□□ 2
GTF3C4-202ENST00000483873 ZNF571Q7Z3V5 609 aaPredicted RBP27.54■■■□□ 2
GTF3C4-202ENST00000483873 XPO6Q96QU8 1125 aaKnown RBP27.54■■■□□ 2
GTF3C4-202ENST00000483873 IER2Q9BTL4 223 aa27.54■■■□□ 2
GTF3C4-202ENST00000483873 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.54■■■□□ 2
GTF3C4-202ENST00000483873 DEC1Q9P2X7 70 aa27.54■■■□□ 2
GTF3C4-202ENST00000483873 TMEM59LQ9UK28 342 aa27.54■■■□□ 2
GTF3C4-202ENST00000483873 CBFA2T2O43439 604 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 GJB6O95452 261 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 APODP05090 189 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 TNFAIP3P21580 790 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 HOXD11P31277 338 aaPredicted RBP27.53■■■□□ 2
GTF3C4-202ENST00000483873 SLC6A4P31645 630 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 SGSHP51688 502 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 RFWD3Q6PCD5 774 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 TSSK4Q6SA08 328 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 MON1BQ7L1V2 547 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 PHF13Q86YI8 300 aaPredicted RBP27.53■■■□□ 2
GTF3C4-202ENST00000483873 SPEM1Q8N4L4 309 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 NPY6RQ99463 290 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 TAS2R14Q9NYV8 317 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 ADAM22Q9P0K1 906 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 CAPN11Q9UMQ6 739 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 CACNA1HO95180 2353 aa27.53■■■□□ 2
GTF3C4-202ENST00000483873 SLC11A2P49281 568 aa27.52■■■□□ 2
GTF3C4-202ENST00000483873 KLHL30Q0D2K2 578 aa27.52■■■□□ 2
GTF3C4-202ENST00000483873 NME3Q13232 169 aa27.52■■■□□ 2
GTF3C4-202ENST00000483873 FBXO43Q4G163 708 aa27.52■■■□□ 2
GTF3C4-202ENST00000483873 GRAMD4Q6IC98 578 aa27.52■■■□□ 2
GTF3C4-202ENST00000483873 EMC1Q8N766 993 aa27.52■■■□□ 2
GTF3C4-202ENST00000483873 TERB1Q8NA31 727 aa27.52■■■□□ 2
GTF3C4-202ENST00000483873 RPLP0P6Q8NHW5 317 aa27.52■■■□□ 2
GTF3C4-202ENST00000483873 DDI1Q8WTU0 396 aa27.52■■■□□ 2
GTF3C4-202ENST00000483873 PRMT8Q9NR22 394 aaPredicted RBP27.52■■■□□ 2
GTF3C4-202ENST00000483873 FAM86C1Q9NVL1 165 aa27.52■■■□□ 2
GTF3C4-202ENST00000483873 POLR3BQ9NW08 1133 aaPredicted RBP27.52■■■□□ 2
GTF3C4-202ENST00000483873 CLEC4EQ9ULY5 219 aa27.52■■■□□ 2
GTF3C4-202ENST00000483873 MYO18AQ92614 2054 aaKnown RBP27.52■■■□□ 2
GTF3C4-202ENST00000483873 M0QYT0 321 aa27.51■■□□□ 1.99
GTF3C4-202ENST00000483873 APOEP02649 317 aa27.51■■□□□ 1.99
GTF3C4-202ENST00000483873 CYBBP04839 570 aa27.51■■□□□ 1.99
GTF3C4-202ENST00000483873 HOXC13P31276 330 aa27.51■■□□□ 1.99
GTF3C4-202ENST00000483873 GRIA2P42262 883 aa27.51■■□□□ 1.99
GTF3C4-202ENST00000483873 SULT1E1P49888 294 aa27.51■■□□□ 1.99
GTF3C4-202ENST00000483873 AZIN2Q96A70 460 aa27.51■■□□□ 1.99
GTF3C4-202ENST00000483873 MYEOVQ96EZ4 313 aa27.51■■□□□ 1.99
GTF3C4-202ENST00000483873 TBCBQ99426 244 aa27.51■■□□□ 1.99
GTF3C4-202ENST00000483873 NUCKS1Q9H1E3 243 aaKnown RBP27.51■■□□□ 1.99
GTF3C4-202ENST00000483873 CISD3P0C7P0 127 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 CHRM1P11229 460 aaPredicted RBP27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 GBP1P32455 592 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 DGKGP49619 791 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 ZBED6P86452 979 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 CSTF1Q05048 431 aaKnown RBP27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 MPPE1Q53F39 396 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 ACAD10Q6JQN1 1059 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 DNAAF5Q86Y56 855 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 JOSD2Q8TAC2 188 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 PIGVQ9NUD9 493 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 FBXO10Q9UK96 956 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 FANCMQ8IYD8 2048 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 PIEZO1Q92508 2521 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 A0A0A0MRY4 1105 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 TBC1D3BA6NDS4 549 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 TMCO5BA8MYB1 307 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 CALB1P05937 261 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 SP9P0CG40 484 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 HOXD9P28356 352 aaPredicted RBP27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 CASP14P31944 242 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 CCR3P51677 355 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 NHLH1Q02575 133 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 C2orf27AQ580R0 203 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 EMC10Q5UCC4 262 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 PIK3R6Q5UE93 754 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 HGSNATQ68CP4 663 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 MAMSTRQ6ZN01 415 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 USP33Q8TEY7 942 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 NT5C3BQ969T7 300 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 IQCDQ96DY2 449 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 CFAP57Q96MR6 1250 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 PRICKLE1Q96MT3 831 aaPredicted RBP27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 ZDHHC4Q9NPG8 344 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 RRN3Q9NYV6 651 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 STAP1Q9ULZ2 295 aa27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 LUC7L2Q9Y383 392 aaKnown RBP27.5■■□□□ 1.99
GTF3C4-202ENST00000483873 DDX3XO00571 662 aaKnown RBP eCLIP27.49■■□□□ 1.997e-9■■■■□ 21.2
GTF3C4-202ENST00000483873 CXCL12P48061 93 aa27.49■■□□□ 1.99
GTF3C4-202ENST00000483873 ATXN1P54253 815 aaKnown RBP27.49■■□□□ 1.99
GTF3C4-202ENST00000483873 GSCP56915 257 aaPredicted RBP27.49■■□□□ 1.99
GTF3C4-202ENST00000483873 C1QBPQ07021 282 aaKnown RBP27.49■■□□□ 1.99
GTF3C4-202ENST00000483873 C10orf76Q5T2E6 689 aa27.49■■□□□ 1.99
GTF3C4-202ENST00000483873 ATOH1Q92858 354 aaPredicted RBP27.49■■□□□ 1.99
GTF3C4-202ENST00000483873 RNF34Q969K3 372 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms