RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CEP350Q5VT06 3117 aa13.69□□□□□ -0.22
CPNE1-225ENST00000483495 FAM72CH0Y354 149 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 CREB3O43889 395 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 TADA2AO75478 443 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 AMHP03971 560 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 VAV1P15498 845 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 CHN1P15882 459 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 GLUD2P49448 558 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 HNRNPH2P55795 449 aaKnown RBP13.68□□□□□ -0.22
CPNE1-225ENST00000483495 PDK1Q15118 436 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 NFE2Q16621 373 aaPredicted RBP13.68□□□□□ -0.22
CPNE1-225ENST00000483495 BBS9Q3SYG4 887 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 SLC39A12Q504Y0 691 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 FAM72AQ5TYM5 149 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 HEATR6Q6AI08 1181 aaKnown RBP13.68□□□□□ -0.22
CPNE1-225ENST00000483495 FAM72DQ6L9T8 149 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 TADA2BQ86TJ2 420 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 FAM72BQ86X60 149 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 ANKMY2Q8IV38 441 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 ABI1Q8IZP0 508 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 MDM1Q8TC05 714 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 DQX1Q8TE96 717 aaKnown RBP13.68□□□□□ -0.22
CPNE1-225ENST00000483495 ATXN2LQ8WWM7 1075 aaKnown RBP13.68□□□□□ -0.22
CPNE1-225ENST00000483495 HTR3CQ8WXA8 447 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 WDCPQ9H6R7 721 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 RABGEF1Q9UJ41 708 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 PRDM4Q9UKN5 801 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 ADAM28Q9UKQ2 775 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 TEX264Q9Y6I9 313 aa13.68□□□□□ -0.22
CPNE1-225ENST00000483495 A0A0A0MRY4 1105 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 OR4Q2P0C623 313 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 TPSB2P20231 275 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 GRIK1P39086 918 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 NR1H3Q13133 447 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 SEMA5AQ13591 1074 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 TPSAB1Q15661 275 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 VARS2Q5ST30 1063 aaKnown RBP13.67□□□□□ -0.22
CPNE1-225ENST00000483495 VSTM1Q6UX27 236 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 VPS52Q8N1B4 723 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 LRRN4Q8WUT4 740 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 C8orf48Q96LL4 319 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 SPATA13Q96N96 652 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 XPO6Q96QU8 1125 aaKnown RBP13.67□□□□□ -0.22
CPNE1-225ENST00000483495 SELENOSQ9BQE4 189 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 CCDC134Q9H6E4 229 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 ACSS3Q9H6R3 686 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 ABCC13Q9NSE7 274 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 GMNCA6NCL1 334 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 HOXA2O43364 376 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 METTL18O95568 372 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 FAM107AO95990 144 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 CXCL10P02778 98 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 ERCC2P18074 760 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 CYP2C18P33260 490 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 MAGEA3P43357 314 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 MAGEA11P43364 429 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 TPI1P60174 286 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 YWHAGP61981 247 aaKnown RBP eCLIP13.67□□□□□ -0.22
CPNE1-225ENST00000483495 HTRA3P83110 453 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 TCTN1Q2MV58 587 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 FOXR1Q6PIV2 292 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 C3orf62Q6ZUJ4 267 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 PDZD4Q76G19 769 aaPredicted RBP13.67□□□□□ -0.22
CPNE1-225ENST00000483495 CAND1Q86VP6 1230 aaKnown RBP13.67□□□□□ -0.22
CPNE1-225ENST00000483495 NLRP14Q86W24 1093 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 DEFB118Q96PH6 123 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 LGMNQ99538 433 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 DHRS4Q9BTZ2 278 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 TKTL2Q9H0I9 626 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 OSBPL2Q9H1P3 480 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 TMEM51Q9NW97 253 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 MARCH5Q9NX47 278 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 ARHGEF38Q9NXL2 777 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 BRCA2P51587 3418 aa13.67□□□□□ -0.22
CPNE1-225ENST00000483495 OR6C75A6NL08 312 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 PPP1R12AO14974 1030 aaPredicted RBP13.66□□□□□ -0.22
CPNE1-225ENST00000483495 IRAK2O43187 625 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 OPHN1O60890 802 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 SPAG6O75602 509 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 ATP2A2P16615 1042 aaKnown RBP13.66□□□□□ -0.22
CPNE1-225ENST00000483495 FGFR3P22607 806 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 SSTR1P30872 391 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 FDFT1P37268 417 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 ELK3P41970 407 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 SEC24CP53992 1094 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 GEMIN4P57678 1058 aaKnown RBP13.66□□□□□ -0.22
CPNE1-225ENST00000483495 BRMS1LQ5PSV4 323 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 ANKRD20A2Q5SQ80 823 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 ANKRD20A1Q5TYW2 823 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 ANKRD20A3Q5VUR7 823 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 ANKRD33Q7Z3H0 272 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 SCD5Q86SK9 330 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 NPAS4Q8IUM7 802 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 IGDCC3Q8IVU1 814 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 PALM2Q8IXS6 379 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 AGGF1Q8N302 714 aaeCLIP13.66□□□□□ -0.22
CPNE1-225ENST00000483495 LRRC39Q96DD0 335 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 CCT8L2Q96SF2 557 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 SMOC2Q9H3U7 446 aa13.66□□□□□ -0.22
CPNE1-225ENST00000483495 PPANQ9NQ55 473 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms