RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 DEFB106AQ8N104 65 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 ZNF276Q8N554 614 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 PRSS33Q8NF86 280 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 ZNF397Q8NF99 534 aaPredicted RBP10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 DDI1Q8WTU0 396 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 SERPINB11Q96P15 392 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 XPO6Q96QU8 1125 aaKnown RBP10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 PRRX2Q99811 253 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 AGPAT1Q99943 283 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 ARHGEF4Q9NR80 690 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 DNAJC17Q9NVM6 304 aaKnown RBP10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 DDIT4Q9NX09 232 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 AGO1Q9UL18 857 aaKnown RBP10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 MYO18AQ92614 2054 aaKnown RBP10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 DCHS1Q96JQ0 3298 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 CACNA1IQ9P0X4 2223 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 SHISA7A6NL88 538 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 DAB1O75553 588 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 TRUB2O95900 331 aaKnown RBP10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 KLKB1P03952 638 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 TYRP14679 529 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 DRD1P21728 446 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 GBP1P32455 592 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 CDH5P33151 784 aaPredicted RBP10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 CHKAP35790 457 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 OPRD1P41143 372 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 MAGEA9P43362 315 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 RPL34P49207 117 aaKnown RBP10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 SLC11A2P49281 568 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 SULT1E1P49888 294 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 PTPN5P54829 565 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 MLLT6P55198 1093 aaPredicted RBP10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 PITX1P78337 314 aaPredicted RBP10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 CSTF1Q05048 431 aaKnown RBP10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 KLHL30Q0D2K2 578 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 MTAPQ13126 283 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 ANGPT1Q15389 498 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 CLEC16AQ2KHT3 1053 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 TMEM196Q5HYL7 178 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 NUGGCQ68CJ6 796 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 GRAMD4Q6IC98 578 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 OLFML1Q6UWY5 402 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 Q6ZNB5 142 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 C12orf40Q86WS4 652 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 XYLT1Q86Y38 959 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 C1orf210Q8IVY1 113 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 UNC45BQ8IWX7 931 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 BAP1Q92560 729 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 ATOH1Q92858 354 aaPredicted RBP10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 PNKPQ96T60 521 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 NUP58Q9BVL2 599 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 FBRSL1Q9HCM7 1045 aaKnown RBP10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 METTL5Q9NRN9 209 aaKnown RBP10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 FAM86C1Q9NVL1 165 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 WDR35Q9P2L0 1181 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 DEC1Q9P2X7 70 aa10.4□□□□□ -0.74
SPTLC1-206ENST00000482632 GOLGA6L7A0A1B0GV03 622 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 TYW5A2RUC4 315 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 TBC1D3BA6NDS4 549 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 M0QYT0 321 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 IRAK2O43187 625 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 GREM1O60565 184 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 FYNP06241 537 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 GLI1P08151 1106 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 TPM1P09493 284 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 CHRNB1P11230 501 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 SKILP12757 684 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 RPS9P46781 194 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 ZNF445P59923 1031 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 GUCA2AQ02747 115 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 QPCTQ16769 361 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 C2orf27AQ580R0 203 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 ZC3H12AQ5D1E8 599 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 RFWD3Q6PCD5 774 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 THSD4Q6ZMP0 1018 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 SND1Q7KZF4 910 aaKnown RBP eCLIP10.39□□□□□ -0.754e-6■□□□□ 10.6
SPTLC1-206ENST00000482632 SLC26A9Q7LBE3 791 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 CHSY1Q86X52 802 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 ZDHHC17Q8IUH5 632 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 KIAA1958Q8N8K9 716 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 ATP6V0D2Q8N8Y2 350 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 CLDN23Q96B33 292 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 PCDHB18PQ96TA0 734 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 TRIM5Q9C035 493 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 CHRDQ9H2X0 955 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 HAUS4Q9H6D7 363 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 ASNSD1Q9NWL6 643 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 ADAM22Q9P0K1 906 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 DLGAP2Q9P1A6 1054 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 STIM2Q9P246 746 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 SLC12A6Q9UHW9 1150 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 STAP1Q9ULZ2 295 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 MYO6Q9UM54 1294 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 TLR6Q9Y2C9 796 aa10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 LUC7L2Q9Y383 392 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-206ENST00000482632 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.39□□□□□ -0.752e-11■■■□□ 15.7
SPTLC1-206ENST00000482632 ZFHX2Q9C0A1 2572 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms