RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 OCEL1Q9H607 264 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 TLE6Q9H808 572 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 DMAP1Q9NPF5 467 aaPredicted RBP13.09□□□□□ -0.31
VPS52-218ENST00000482399 GTSE1Q9NYZ3 720 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 CDH22Q9UJ99 828 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 TLK1Q9UKI8 766 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 ADAMTS6Q9UKP5 1117 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 SSX2IPQ9Y2D8 614 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 C10orf71Q711Q0 1435 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 KDM4FA0A1W2PPD8 638 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 SLC15A5A6NIM6 579 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 POU5F1BQ06416 359 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 RARS2Q5T160 578 aaKnown RBP13.09□□□□□ -0.31
VPS52-218ENST00000482399 ABHD15Q6UXT9 468 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 CDKL3Q8IVW4 592 aaPredicted RBP13.09□□□□□ -0.31
VPS52-218ENST00000482399 NR1H4Q96RI1 486 aaPredicted RBP13.09□□□□□ -0.31
VPS52-218ENST00000482399 OXCT2Q9BYC2 517 aaPredicted RBP13.09□□□□□ -0.31
VPS52-218ENST00000482399 TASP1Q9H6P5 420 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 XPNPEP3Q9NQH7 507 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 POMPQ9Y244 141 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 SUPT3HO75486 399 aa13.08□□□□□ -0.31
VPS52-218ENST00000482399 RFPL1O75677 317 aa13.08□□□□□ -0.31
VPS52-218ENST00000482399 ALDH1A3P47895 512 aa13.08□□□□□ -0.31
VPS52-218ENST00000482399 USP46P62068 366 aa13.08□□□□□ -0.31
VPS52-218ENST00000482399 HSP90AA5PQ58FG0 334 aa13.08□□□□□ -0.31
VPS52-218ENST00000482399 FRMD7Q6ZUT3 714 aa13.08□□□□□ -0.31
VPS52-218ENST00000482399 NDRG1Q92597 394 aaKnown RBP13.08□□□□□ -0.31
VPS52-218ENST00000482399 KIF12Q96FN5 646 aa13.08□□□□□ -0.31
VPS52-218ENST00000482399 ELOVL4Q9GZR5 314 aa13.08□□□□□ -0.31
VPS52-218ENST00000482399 FAM192AQ9GZU8 254 aa13.08□□□□□ -0.31
VPS52-218ENST00000482399 TMEM216Q9P0N5 145 aa13.08□□□□□ -0.31
VPS52-218ENST00000482399 PSAT1Q9Y617 370 aa13.08□□□□□ -0.31
VPS52-218ENST00000482399 RGS20O76081 388 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 STAMBPO95630 424 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 PGK2P07205 417 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 GSTA3Q16772 222 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 CCDC14Q49A88 953 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 PPM1LQ5SGD2 360 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 C6orf52Q5T4I8 152 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 TMCO4Q5TGY1 634 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 COLGALT1Q8NBJ5 622 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 USP33Q8TEY7 942 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 NLRP7Q8WX94 980 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 C7orf26Q96N11 449 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 KCNK16Q96T55 309 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 EBNA1BP2Q99848 306 aaKnown RBP13.08□□□□□ -0.32
VPS52-218ENST00000482399 POPDC2Q9HBU9 364 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 SSU72Q9NP77 194 aaKnown RBP13.08□□□□□ -0.32
VPS52-218ENST00000482399 GALNT8Q9NY28 637 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 MFHAS1Q9Y4C4 1052 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 ASB3Q9Y575 518 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 LACTBL1A8MY62 500 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 STX16-NPEPL1H3BU86 382 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 CHADO15335 359 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 UQCRBP14927 111 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 SLC18A2Q05940 514 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 PDK1Q15118 436 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 JADE1Q6IE81 842 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 CYP2R1Q6VVX0 501 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 STRA8Q7Z7C7 330 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 PYROXD2Q8N2H3 581 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 EXT2Q93063 718 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 LENG8Q96PV6 779 aaPredicted RBP13.08□□□□□ -0.32
VPS52-218ENST00000482399 SERPINI1Q99574 410 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 MRIQ9BWK5 157 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 IL1RL2Q9HB29 575 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 PRM3Q9NNZ6 103 aa13.08□□□□□ -0.32
VPS52-218ENST00000482399 F8W8V4 182 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 GLRA3O75311 464 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 SERPINE1P05121 402 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 CHN2P52757 468 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 TNFAIP1Q13829 316 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 EFCAB12Q6NXP0 572 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 CAND1Q86VP6 1230 aaKnown RBP13.07□□□□□ -0.32
VPS52-218ENST00000482399 PCDH20Q8N6Y1 951 aaKnown RBP13.07□□□□□ -0.32
VPS52-218ENST00000482399 RDM1Q8NG50 284 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 PCDH19Q8TAB3 1148 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 RNF34Q969K3 372 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 DEFB129Q9H1M3 183 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 PREBQ9HCU5 417 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 MAST2Q6P0Q8 1798 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 A0A088AWK7 358 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 PHGDHO43175 533 aaKnown RBP13.07□□□□□ -0.32
VPS52-218ENST00000482399 TFE3P19532 575 aaPredicted RBP13.07□□□□□ -0.32
VPS52-218ENST00000482399 CCR10P46092 362 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 SERPINB9P50453 376 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 EFNA5P52803 228 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 TMEM132BQ14DG7 1078 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 DBN1Q16643 649 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 BOLA3Q53S33 107 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 TMEM198Q66K66 360 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 GADL1Q6ZQY3 521 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 ZNF354CQ86Y25 554 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 ZNF276Q8N554 614 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 ZNF781Q8N8C0 355 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 DIS3LQ8TF46 1054 aaKnown RBP13.07□□□□□ -0.32
VPS52-218ENST00000482399 NAT14Q8WUY8 206 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 FAM49AQ9H0Q0 323 aaPredicted RBP13.07□□□□□ -0.32
VPS52-218ENST00000482399 COG4Q9H9E3 785 aa13.07□□□□□ -0.32
VPS52-218ENST00000482399 GPC4O75487 556 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms