RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 LMNB2Q03252 620 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 SPEM2Q0P670 501 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 ELF2Q15723 593 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 GEN1Q17RS7 908 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 EFHC1Q5JVL4 640 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 MPP7Q5T2T1 576 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 TMEM35BQ8NCS4 154 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 ADAM32Q8TC27 787 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 UCMAQ8WVF2 138 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 HMGB4Q8WW32 186 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 TMA16Q96EY4 203 aaKnown RBP12.36□□□□□ -0.43
HMGN1-213ENST00000482192 SLC39A13Q96H72 371 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 PIWIL1Q96J94 861 aaKnown RBP12.36□□□□□ -0.43
HMGN1-213ENST00000482192 ACOX2Q99424 681 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 GABRG3Q99928 467 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 FAM207AQ9NSI2 230 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-213ENST00000482192 ASNSD1Q9NWL6 643 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 TJP2Q9UDY2 1190 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 LIMA1Q9UHB6 759 aaKnown RBP12.36□□□□□ -0.43
HMGN1-213ENST00000482192 USP18Q9UMW8 372 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 USP34Q70CQ2 3546 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 TYW5A2RUC4 315 aaKnown RBP12.35□□□□□ -0.43
HMGN1-213ENST00000482192 LGALS16A8MUM7 142 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 DCLK1O15075 740 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 TIMM44O43615 452 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 FOXD2O60548 495 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-213ENST00000482192 RHOBTB1O94844 696 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 LSM8O95777 96 aaKnown RBP12.35□□□□□ -0.43
HMGN1-213ENST00000482192 TRUB2O95900 331 aaKnown RBP12.35□□□□□ -0.43
HMGN1-213ENST00000482192 IGLV3-25P01717 112 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 APOEP02649 317 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 ERBB2P04626 1255 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 CDK11BP21127 795 aaKnown RBP12.35□□□□□ -0.43
HMGN1-213ENST00000482192 TGM1P22735 817 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 SLC6A4P31645 630 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 GBP1P32455 592 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 CDH5P33151 784 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-213ENST00000482192 WASP42768 502 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 COPB1P53618 953 aaKnown RBP12.35□□□□□ -0.43
HMGN1-213ENST00000482192 POLR2FP61218 127 aaKnown RBP12.35□□□□□ -0.43
HMGN1-213ENST00000482192 BYSLQ13895 437 aaKnown RBP12.35□□□□□ -0.43
HMGN1-213ENST00000482192 NCAPHQ15003 741 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 TAF5Q15542 800 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 CSRP2Q16527 193 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 PLK5Q496M5 336 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 PTPN20Q4JDL3 420 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 DCAF6Q58WW2 860 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 FAM133BQ5BKY9 247 aaKnown RBP12.35□□□□□ -0.43
HMGN1-213ENST00000482192 PIK3R6Q5UE93 754 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 OLFML1Q6UWY5 402 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 FAM183BPQ6ZVS7 135 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 ZDHHC17Q8IUH5 632 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 PGBD3Q8N328 593 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 ZNF557Q8N988 423 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-213ENST00000482192 HJURPQ8NCD3 748 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-213ENST00000482192 OLIG1Q8TAK6 271 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 SPACA7Q96KW9 195 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 SLC2A13Q96QE2 648 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 GANQ9H2C0 597 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 FAM204AQ9H8W3 233 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 PARD6AQ9NPB6 346 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 CACNA2D2Q9NY47 1150 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 CLEC4EQ9ULY5 219 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 PCDHGA5Q9Y5G8 931 aa12.35□□□□□ -0.43
HMGN1-213ENST00000482192 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 A0A1W2PQF6 199 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 LRRC10BA6NIK2 292 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 EPN2O95208 641 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 SLC2A3P11169 496 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 ZNF18P17022 549 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 GABRG2P18507 467 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 HLA-FP30511 346 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 KLK7P49862 253 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 CDK17Q00537 523 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 SLC6A3Q01959 620 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 ARID5AQ03989 594 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 STARD3Q14849 445 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 SYCP1Q15431 976 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 ANO6Q4KMQ2 910 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 TAF3Q5VWG9 929 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 NADSYN1Q6IA69 706 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 OR6B2Q6IFH4 312 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 CAVIN1Q6NZI2 390 aaKnown RBP12.34□□□□□ -0.43
HMGN1-213ENST00000482192 RFWD3Q6PCD5 774 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 SLC26A9Q7LBE3 791 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 NOP9Q86U38 636 aaKnown RBP12.34□□□□□ -0.43
HMGN1-213ENST00000482192 DEFB106AQ8N104 65 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 AOPEPQ8N6M6 819 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 MSANTD4Q8NCY6 345 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 ZNF397Q8NF99 534 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-213ENST00000482192 EPS8L1Q8TE68 723 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 WFIKKN2Q8TEU8 576 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 DDX1Q92499 740 aaKnown RBP12.34□□□□□ -0.43
HMGN1-213ENST00000482192 PCMTD1Q96MG8 357 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-213ENST00000482192 BPIFA3Q9BQP9 254 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 CIPCQ9C0C6 399 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 DUSP15Q9H1R2 295 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-213ENST00000482192 SEMA4GQ9NTN9 838 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.34□□□□□ -0.43
HMGN1-213ENST00000482192 ELOVL2Q9NXB9 296 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms