RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 DRAXINQ8NBI3 349 aaPredicted RBP12.05□□□□□ -0.48
HPS4-212ENST00000481910 FNIP1Q8TF40 1166 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 TBCBQ99426 244 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 CNPY3Q9BT09 278 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 DDIT4Q9NX09 232 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 TRMT1Q9NXH9 659 aaKnown RBP12.05□□□□□ -0.48
HPS4-212ENST00000481910 IP6K2Q9UHH9 426 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 CDH7Q9ULB5 785 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 MYO1CO00159 1063 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 DPYSL4O14531 572 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 MSI1O43347 362 aaKnown RBP12.05□□□□□ -0.48
HPS4-212ENST00000481910 RNF8O76064 485 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 MTA2O94776 668 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 OLFM2O95897 454 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 PIGHQ14442 188 aaPredicted RBP12.05□□□□□ -0.48
HPS4-212ENST00000481910 MESDQ14696 234 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 LEXMQ3ZCV2 418 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 SH3PXD2AQ5TCZ1 1133 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 ZNF662Q6ZS27 426 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 TAC4Q86UU9 113 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 ARID3BQ8IVW6 561 aaPredicted RBP12.05□□□□□ -0.48
HPS4-212ENST00000481910 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.05□□□□□ -0.48
HPS4-212ENST00000481910 ZSCAN18Q8TBC5 510 aaPredicted RBP12.05□□□□□ -0.48
HPS4-212ENST00000481910 SERPINB11Q96P15 392 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 SMG9Q9H0W8 520 aaKnown RBP12.05□□□□□ -0.48
HPS4-212ENST00000481910 SMOC2Q9H3U7 446 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 FAM204AQ9H8W3 233 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 SMPD4Q9NXE4 827 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 GDE1Q9NZC3 331 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 BLOC1S6Q9UL45 172 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 SLC12A8A0AV02 714 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 TMEM110-MUSTN1A8MSY1 372 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 F9P00740 461 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 PYGBP11216 843 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 ARHGAP25P42331 645 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 HADHBP55084 474 aaKnown RBP12.04□□□□□ -0.48
HPS4-212ENST00000481910 COG7P83436 770 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 TFF2Q03403 129 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 DEUP1Q05D60 604 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 ZNF252P-AS1Q0IIN9 211 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 IFI16Q16666 785 aaKnown RBP12.04□□□□□ -0.48
HPS4-212ENST00000481910 TTC16Q8NEE8 873 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 FAM172AQ8WUF8 416 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 BHMTQ93088 406 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 RNF34Q969K3 372 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 ADAM33Q9BZ11 813 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 PRDM6Q9NQX0 595 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 GKN1Q9NS71 199 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 TDP1Q9NUW8 608 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 LCMT1Q9UIC8 334 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 CPQQ9Y646 472 aa12.04□□□□□ -0.48
HPS4-212ENST00000481910 IRAK2O43187 625 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 HMBSP08397 361 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 MYBL2P10244 700 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 SP100P23497 879 aaPredicted RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 RDXP35241 583 aaKnown RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 KPNA1P52294 538 aaPredicted RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 TBX4P57082 545 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 SLC7A9P82251 487 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 ACAP1Q15027 740 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 PTCRAQ6ISU1 281 aaPredicted RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 SND1Q7KZF4 910 aaKnown RBP eCLIP12.03□□□□□ -0.48
HPS4-212ENST00000481910 REXO1L1PQ8IX06 675 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 CCAR2Q8N163 923 aaKnown RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 RNF10Q8N5U6 811 aaKnown RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 TPCN2Q8NHX9 752 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 CENPIQ92674 756 aaPredicted RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 PGAP3Q96FM1 320 aaPredicted RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 MYADMQ96S97 322 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 KLF16Q9BXK1 252 aaPredicted RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 RETREG1Q9H6L5 497 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 PIGVQ9NUD9 493 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 USTQ9Y2C2 406 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 TLR6Q9Y2C9 796 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 COMMD10Q9Y6G5 202 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 DOCK8Q8NF50 2099 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 USP27XA6NNY8 438 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 BUB1BO60566 1050 aaPredicted RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 PROSCO94903 275 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 ENDOD1O94919 500 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 MOCS3O95396 460 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 IGLV3-25P01717 112 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 LAMP2P13473 410 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 MAGEA9P43362 315 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 ATXN1P54253 815 aaKnown RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 HDAC4P56524 1084 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 ZXDBP98169 803 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 RBBP5Q15291 538 aaKnown RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 TRIP4Q15650 581 aaPredicted RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 RAB6CQ53S08 254 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 FAM78AQ5JUQ0 283 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 OTUD1Q5VV17 481 aaPredicted RBP12.03□□□□□ -0.48
HPS4-212ENST00000481910 SCYL2Q6P3W7 929 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 STRADAQ7RTN6 431 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 OTOP3Q7RTS5 596 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 DAAM2Q86T65 1068 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 TAX1BP1Q86VP1 789 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 KIAA1524Q8TCG1 905 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 SMARCD2Q92925 531 aa12.03□□□□□ -0.48
HPS4-212ENST00000481910 USP13Q92995 863 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms