RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 CNGB3Q9NQW8 809 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 ABCC13Q9NSE7 274 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 ELOVL2Q9NXB9 296 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 CTNND2Q9UQB3 1225 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 PCNX2A6NKB5 2137 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 MEI4A8MW99 385 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 BIN1O00499 593 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 NPC1O15118 1278 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 CALCAP01258 141 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 EPHX1P07099 455 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 PAEPP09466 180 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 PRKCHP24723 683 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 BRD2P25440 801 aaKnown RBP15.91■□□□□ 0.14
LIMS3-203ENST00000480744 CD6P30203 668 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 PPP1R2P41236 205 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 DAOAP59103 153 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 EIF4HQ15056 248 aaKnown RBP15.91■□□□□ 0.14
LIMS3-203ENST00000480744 SERPINA13PQ6UXR4 307 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 RRAGAQ7L523 313 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 FAM217AQ8IXS0 508 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 HDDC3Q8N4P3 179 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 OR2I1PQ8NGU4 316 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 SLC2A11Q9BYW1 496 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 MKRN2Q9H000 416 aaKnown RBP15.91■□□□□ 0.14
LIMS3-203ENST00000480744 SLC32A1Q9H598 525 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 CAPN10Q9HC96 672 aa15.91■□□□□ 0.14
LIMS3-203ENST00000480744 BICDL2A1A5D9 508 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 RNF225M0QZC1 329 aaPredicted RBP15.9■□□□□ 0.14
LIMS3-203ENST00000480744 MAOBP27338 520 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 HOXD9P28356 352 aaPredicted RBP15.9■□□□□ 0.14
LIMS3-203ENST00000480744 STX17P56962 302 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 E2F5Q15329 346 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 PLEKHG6Q3KR16 790 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 PKDCCQ504Y2 493 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 SYCP2LQ5T4T6 812 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 TTI2Q6NXR4 508 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 PMF1Q6P1K2 205 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 TMPRSS6Q8IU80 811 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 MINDY1Q8N5J2 469 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 RBBP8NLQ8NC74 664 aaPredicted RBP15.9■□□□□ 0.14
LIMS3-203ENST00000480744 PRCCQ92733 491 aaPredicted RBP15.9■□□□□ 0.14
LIMS3-203ENST00000480744 GOLGA1Q92805 767 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 FOXJ1Q92949 421 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 TMA16Q96EY4 203 aaKnown RBP15.9■□□□□ 0.14
LIMS3-203ENST00000480744 SIPA1Q96FS4 1042 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 TOE1Q96GM8 510 aaKnown RBP15.9■□□□□ 0.14
LIMS3-203ENST00000480744 ZSWIM1Q9BR11 485 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 GPR174Q9BXC1 333 aa15.9■□□□□ 0.14
LIMS3-203ENST00000480744 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.9■□□□□ 0.14
LIMS3-203ENST00000480744 MUC22E2RYF6 1773 aaPredicted RBP15.9■□□□□ 0.14
LIMS3-203ENST00000480744 CEP295Q9C0D2 2601 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 USP24Q9UPU5 2620 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 CACNA1EQ15878 2313 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 PPP1R3GB7ZBB8 358 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 ARHGAP33O14559 1287 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 OPHN1O60890 802 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 SYPP08247 313 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 ACADMP11310 421 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 HLA-EP13747 358 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 GNSP15586 552 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 SPINK2P20155 84 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 ZNF132P52740 706 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 ENPP2Q13822 863 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 CNGA2Q16280 664 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 FNDC3BQ53EP0 1204 aaKnown RBP15.89■□□□□ 0.13
LIMS3-203ENST00000480744 WDR45BQ5MNZ6 344 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 ADGRF1Q5T601 910 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 TMEM215Q68D42 235 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 ARHGEF19Q8IW93 802 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 SCML4Q8N228 414 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 CLEC4CQ8WTT0 213 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 CYB5D2Q8WUJ1 264 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 SLC35F5Q8WV83 523 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 ZNF419Q96HQ0 510 aaPredicted RBP15.89■□□□□ 0.13
LIMS3-203ENST00000480744 MIS12Q9H081 205 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 ITM2CQ9NQX7 267 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 WSB2Q9NYS7 404 aaPredicted RBP15.89■□□□□ 0.13
LIMS3-203ENST00000480744 SUSD2Q9UGT4 822 aa15.89■□□□□ 0.13
LIMS3-203ENST00000480744 NUMA1Q14980 2115 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 SPAARA0A1B0GVQ0 90 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 PMM2O15305 246 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 TIMM44O43615 452 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 GABBR2O75899 941 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 LATS1O95835 1130 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 TOP3BO95985 862 aaKnown RBP15.88■□□□□ 0.13
LIMS3-203ENST00000480744 LTFP02788 710 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 NCAM1P13591 858 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 BMP6P22004 513 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 HLA-FP30511 346 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 ANP32AP39687 249 aaKnown RBP15.88■□□□□ 0.13
LIMS3-203ENST00000480744 TPMTP51580 245 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 ZNF445P59923 1031 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 KCNH2Q12809 1159 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 STILQ15468 1287 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 MSANTD2Q6P1R3 559 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 RFWD3Q6PCD5 774 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 CHST9Q7L1S5 443 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 METTL3Q86U44 580 aaKnown RBP15.88■□□□□ 0.13
LIMS3-203ENST00000480744 FAM124AQ86V42 546 aa15.88■□□□□ 0.13
LIMS3-203ENST00000480744 ELOA2Q8IYF1 753 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms