RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 BTN2A3PQ96KV6 586 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 PIGVQ9NUD9 493 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 CALCOCO1Q9P1Z2 691 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 KIAA1549LQ6ZVL6 1849 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 SHISA7A6NL88 538 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 GFRA2O00451 464 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 ATMINO43313 823 aaPredicted RBP20.5■□□□□ 0.87
LIME1-205ENST00000480139 ACSL4O60488 711 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 ADH5P11766 374 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 TFE3P19532 575 aaPredicted RBP20.5■□□□□ 0.87
LIME1-205ENST00000480139 ABCB4P21439 1286 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 RDXP35241 583 aaKnown RBP20.5■□□□□ 0.87
LIME1-205ENST00000480139 RPL7AP62424 266 aaKnown RBP20.5■□□□□ 0.87
LIME1-205ENST00000480139 GAD2Q05329 585 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 DEUP1Q05D60 604 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 LY6G5CQ5SRR4 150 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 ZNF852Q6ZMS4 543 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 BMP8AQ7Z5Y6 402 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 TMTC1Q8IUR5 882 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 ATP6V0D2Q8N8Y2 350 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 SPC24Q8NBT2 197 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 FNIP1Q8TF40 1166 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 CHFRQ96EP1 664 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 DDX50Q9BQ39 737 aaKnown RBP20.5■□□□□ 0.87
LIME1-205ENST00000480139 THAP2Q9H0W7 228 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 SLC12A6Q9UHW9 1150 aa20.5■□□□□ 0.87
LIME1-205ENST00000480139 TMEM191CA6NGB0 347 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 LCA5LO95447 670 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 CYP1A2P05177 515 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 EIF2DP41214 584 aaKnown RBP20.49■□□□□ 0.87
LIME1-205ENST00000480139 SOX9P48436 509 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 MRE11P49959 708 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 GALCP54803 685 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 GSDMDP57764 484 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 GAB4Q2WGN9 574 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 FAM133BQ5BKY9 247 aaKnown RBP20.49■□□□□ 0.87
LIME1-205ENST00000480139 C10orf76Q5T2E6 689 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 TMEM25Q86YD3 366 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 TTC8Q8TAM2 541 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 RNF34Q969K3 372 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 EXOC4Q96A65 974 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 CNPY3Q9BT09 278 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 SPTLC3Q9NUV7 552 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 ARHGEF38Q9NXL2 777 aa20.49■□□□□ 0.87
LIME1-205ENST00000480139 MRPS17Q9Y2R5 130 aaKnown RBP20.49■□□□□ 0.87
LIME1-205ENST00000480139 SYNJ2BP-COX16A0A087WUM0 186 aa20.48■□□□□ 0.87
LIME1-205ENST00000480139 KANSL1LA0AUZ9 987 aa20.48■□□□□ 0.87
LIME1-205ENST00000480139 H2AFZP0C0S5 128 aa20.48■□□□□ 0.87
LIME1-205ENST00000480139 DESP17661 470 aa20.48■□□□□ 0.87
LIME1-205ENST00000480139 ATP11AP98196 1134 aa20.48■□□□□ 0.87
LIME1-205ENST00000480139 ACBD5Q5T8D3 534 aaPredicted RBP20.48■□□□□ 0.87
LIME1-205ENST00000480139 H2AFVQ71UI9 128 aa20.48■□□□□ 0.87
LIME1-205ENST00000480139 CTNNBL1Q8WYA6 563 aaPredicted RBP20.48■□□□□ 0.87
LIME1-205ENST00000480139 NELL2Q99435 816 aa20.48■□□□□ 0.87
LIME1-205ENST00000480139 C1QTNF1Q9BXJ1 281 aa20.48■□□□□ 0.87
LIME1-205ENST00000480139 OSBPL6Q9BZF3 934 aa20.48■□□□□ 0.87
LIME1-205ENST00000480139 WDCPQ9H6R7 721 aa20.48■□□□□ 0.87
LIME1-205ENST00000480139 TBC1D17Q9HA65 648 aa20.48■□□□□ 0.87
LIME1-205ENST00000480139 COX16Q9P0S2 106 aa20.48■□□□□ 0.87
LIME1-205ENST00000480139 MYOFQ9NZM1 2061 aa20.47■□□□□ 0.87
LIME1-205ENST00000480139 TRDMT1O14717 391 aaKnown RBP20.47■□□□□ 0.87
LIME1-205ENST00000480139 GPR37L1O60883 481 aa20.47■□□□□ 0.87
LIME1-205ENST00000480139 MOCS2O96007 188 aaPredicted RBP20.47■□□□□ 0.87
LIME1-205ENST00000480139 PENKP01210 267 aaPredicted RBP20.47■□□□□ 0.87
LIME1-205ENST00000480139 CYBBP04839 570 aa20.47■□□□□ 0.87
LIME1-205ENST00000480139 TMEM253P0C7T8 217 aa20.47■□□□□ 0.87
LIME1-205ENST00000480139 CYLC1P35663 651 aaPredicted RBP20.47■□□□□ 0.87
LIME1-205ENST00000480139 C15orf59Q2T9L4 293 aaPredicted RBP20.47■□□□□ 0.87
LIME1-205ENST00000480139 NADSYN1Q6IA69 706 aa20.47■□□□□ 0.87
LIME1-205ENST00000480139 ETFBKMTQ8IXQ9 262 aa20.47■□□□□ 0.87
LIME1-205ENST00000480139 FAM172AQ8WUF8 416 aa20.47■□□□□ 0.87
LIME1-205ENST00000480139 FAM3CQ92520 227 aa20.47■□□□□ 0.87
LIME1-205ENST00000480139 BAG1Q99933 345 aaPredicted RBP20.47■□□□□ 0.87
LIME1-205ENST00000480139 BBS2Q9BXC9 721 aa20.47■□□□□ 0.87
LIME1-205ENST00000480139 MFSD1Q9H3U5 465 aa20.47■□□□□ 0.87
LIME1-205ENST00000480139 C11orf16Q9NQ32 467 aa20.47■□□□□ 0.87
LIME1-205ENST00000480139 MYO1AQ9UBC5 1043 aa20.47■□□□□ 0.87
LIME1-205ENST00000480139 INTUQ9ULD6 942 aa20.47■□□□□ 0.87
LIME1-205ENST00000480139 F5P12259 2224 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 CCP110O43303 1012 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 CACNG3O60359 315 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 OPRD1P41143 372 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 VCPP55072 806 aaKnown RBP20.46■□□□□ 0.87
LIME1-205ENST00000480139 HDAC4P56524 1084 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 OGDHQ02218 1023 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 CDO1Q16878 200 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 ANO4Q32M45 955 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 MPPE1Q53F39 396 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 MPP7Q5T2T1 576 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 FYB2Q5VWT5 728 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 TXNDC11Q6PKC3 985 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 TPGS1Q6ZTW0 290 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 TMEM139Q8IV31 216 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 SUGP1Q8IWZ8 645 aaKnown RBP20.46■□□□□ 0.87
LIME1-205ENST00000480139 ZNF687Q8N1G0 1237 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 ARHGEF26Q96DR7 871 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 PRMT1Q99873 361 aaKnown RBP20.46■□□□□ 0.87
LIME1-205ENST00000480139 PACSIN1Q9BY11 444 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 TKTL2Q9H0I9 626 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 LTB4R2Q9NPC1 389 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms