RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 HCSTQ9UBK5 93 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 AFF4Q9UHB7 1163 aaKnown RBP11.4□□□□□ -0.58
VTI1A-204ENST00000480057 HEY1Q9Y5J3 304 aa11.4□□□□□ -0.58
VTI1A-204ENST00000480057 A0A1W2PQH9 124 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 C5orf60A6NFR6 353 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 HMGB1P1B2RPK0 211 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-204ENST00000480057 NT5C1B-RDH14C9J2C7 533 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 PPP1R12AO14974 1030 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-204ENST00000480057 RIPK2O43353 540 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 RNF40O75150 1001 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 GCATO75600 419 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 VNN2O95498 520 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 TTC4O95801 387 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 ABHD2P08910 425 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 ZSCAN5DPP0CG00 497 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 CSF2RAP15509 400 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 AMPD1P23109 780 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 HOXC13P31276 330 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 CCR1P32246 355 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 SERPINB6P35237 376 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 GLUD2P49448 558 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 VPS41P49754 854 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 KPNA1P52294 538 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-204ENST00000480057 GDF10P55107 478 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 TPI1P60174 286 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 CREMQ03060 361 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 GBE1Q04446 702 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 ZNF33AQ06730 810 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 ZNF844Q08AG5 666 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 PPIGQ13427 754 aaKnown RBP eCLIP11.39□□□□□ -0.594e-7■■■□□ 15.3
VTI1A-204ENST00000480057 DDR2Q16832 855 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 MGAT5BQ3V5L5 792 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 AGBL2Q5U5Z8 902 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 KIAA1841Q6NSI8 718 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 RSPO2Q6UXX9 243 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-204ENST00000480057 RNF19BQ6ZMZ0 732 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 CENPUQ71F23 418 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 TAS1R1Q7RTX1 841 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 UBE2Q1Q7Z7E8 422 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 DDX53Q86TM3 631 aaKnown RBP11.39□□□□□ -0.59
VTI1A-204ENST00000480057 ZC3H18Q86VM9 953 aaKnown RBP11.39□□□□□ -0.59
VTI1A-204ENST00000480057 PYROXD2Q8N2H3 581 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 NAT8LQ8N9F0 302 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 FAM71DQ8N9W8 422 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 COLGALT1Q8NBJ5 622 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 ATAD1Q8NBU5 361 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 PDZD8Q8NEN9 1154 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 RIN2Q8WYP3 895 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-204ENST00000480057 PRCCQ92733 491 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-204ENST00000480057 FBXO32Q969P5 355 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 C1orf74Q96LT6 269 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 ROPN1BQ9BZX4 212 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-204ENST00000480057 ROPN1Q9HAT0 212 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-204ENST00000480057 NMUR1Q9HB89 426 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 TMBIM4Q9HC24 238 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 PRDM5Q9NQX1 630 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-204ENST00000480057 TLR8Q9NR97 1041 aaKnown RBP11.39□□□□□ -0.59
VTI1A-204ENST00000480057 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.39□□□□□ -0.59
VTI1A-204ENST00000480057 SPG21Q9NZD8 308 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 DTLQ9NZJ0 730 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 FNIP2Q9P278 1114 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 TLR6Q9Y2C9 796 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 SSX2IPQ9Y2D8 614 aa11.39□□□□□ -0.59
VTI1A-204ENST00000480057 SYNJ2BP-COX16A0A087WUM0 186 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 KCNU1A8MYU2 1149 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 E7ESA3 106 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 CHADO15335 359 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 FGF10O15520 208 aaPredicted RBP11.38□□□□□ -0.59
VTI1A-204ENST00000480057 KCNN4O15554 427 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 MTSS1O43312 755 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 CREB3O43889 395 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 TCEA3O75764 348 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 STK10O94804 968 aaKnown RBP11.38□□□□□ -0.59
VTI1A-204ENST00000480057 ABLIM3O94929 683 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 ZDHHC11BP0C7U3 371 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 MYZAPP0CAP1 466 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 ETS1P14921 441 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 TSHRP16473 764 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 ERCC2P18074 760 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 MX2P20592 715 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 ITGB8P26012 769 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 RBL1P28749 1068 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 CHKAP35790 457 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 ARPP19P56211 112 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 DEFB103AP81534 67 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 SLC10A2Q12908 348 aaPredicted RBP11.38□□□□□ -0.59
VTI1A-204ENST00000480057 BTG3Q14201 252 aaPredicted RBP11.38□□□□□ -0.59
VTI1A-204ENST00000480057 PRKD1Q15139 912 aaPredicted RBP11.38□□□□□ -0.59
VTI1A-204ENST00000480057 CEP85LQ5SZL2 805 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 SPOUT1Q5T280 376 aaKnown RBP11.38□□□□□ -0.59
VTI1A-204ENST00000480057 EMC10Q5UCC4 262 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 SNX30Q5VWJ9 437 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 HEATR6Q6AI08 1181 aaKnown RBP11.38□□□□□ -0.59
VTI1A-204ENST00000480057 PRSS55Q6UWB4 352 aaPredicted RBP11.38□□□□□ -0.59
VTI1A-204ENST00000480057 TADA2BQ86TJ2 420 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 ZNF461Q8TAF7 563 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 ADAM32Q8TC27 787 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 TFB1MQ8WVM0 346 aaKnown RBP11.38□□□□□ -0.59
VTI1A-204ENST00000480057 CPT1BQ92523 772 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 CASP10Q92851 521 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms