RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.41□□□□□ -1.7
CMSS1-204ENST00000479555 SPC24Q8NBT2 197 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 LRTOMTQ8WZ04 291 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 TBC1D5Q92609 795 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 ARHGAP45Q92619 1136 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 PPP1R14BQ96C90 147 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 SUCLG2Q96I99 432 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 CFAP53Q96M91 514 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 BAG1Q99933 345 aaPredicted RBP4.41□□□□□ -1.7
CMSS1-204ENST00000479555 CNPPD1Q9BV87 410 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 LRRC27Q9C0I9 530 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 NUP62CLQ9H1M0 184 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 MRPL46Q9H2W6 279 aaKnown RBP4.41□□□□□ -1.7
CMSS1-204ENST00000479555 ATP6V0A4Q9HBG4 840 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 PYCARDQ9ULZ3 195 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 PCDHA1Q9Y5I3 950 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 RAD54BQ9Y620 910 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 ADGRL2O95490 1459 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 ADGBQ8N7X0 1667 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 IL16Q14005 1332 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 NPHP3Q7Z494 1330 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 RPAP1Q9BWH6 1393 aaPredicted RBP4.4□□□□□ -1.7
CMSS1-204ENST00000479555 IQGAP2Q13576 1575 aa4.4□□□□□ -1.7
CMSS1-204ENST00000479555 ERBINQ96RT1 1412 aa4.4□□□□□ -1.7
CMSS1-204ENST00000479555 CCDC187A0A096LP49 1063 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 BECN2A8MW95 431 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 M0QYG6 137 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 MAP2K7O14733 419 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 ADAMTS3O15072 1205 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 AHCYL1O43865 530 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 PDE8BO95263 885 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 FESP07332 822 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 PEX2P28328 305 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 TKTP29401 623 aaKnown RBP4.4□□□□□ -1.71
CMSS1-204ENST00000479555 HNRNPH1P31943 449 aaKnown RBP4.4□□□□□ -1.71
CMSS1-204ENST00000479555 GCKP35557 465 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 KCNJ5P48544 419 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 ALDH9A1P49189 494 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 PSMD7P51665 324 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 POLGP54098 1239 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-204ENST00000479555 LINC00205P59089 165 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 GRIK3Q13003 919 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 CCDC96Q2M329 555 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 SLC5A9Q2M3M2 681 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 SH2D4BQ5SQS7 431 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 ZNF618Q5T7W0 954 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 EMC10Q5UCC4 262 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 KLHL10Q6JEL2 608 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 CCDC70Q6NSX1 233 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 ATF7IPQ6VMQ6 1270 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 MFN1Q8IWA4 741 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 MAB21L3Q8N8X9 362 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 NRACQ8N912 160 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 ADAMTS15Q8TE58 950 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 AFAP1L1Q8TED9 768 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 N4BP2L2Q92802 583 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-204ENST00000479555 DDX17Q92841 729 aaKnown RBP4.4□□□□□ -1.71
CMSS1-204ENST00000479555 CCDC47Q96A33 483 aaKnown RBP4.4□□□□□ -1.71
CMSS1-204ENST00000479555 CCDC34Q96HJ3 373 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 RPGRIP1Q96KN7 1286 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 ZSCAN31Q96LW9 406 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-204ENST00000479555 MPHOSPH6Q99547 160 aaKnown RBP4.4□□□□□ -1.71
CMSS1-204ENST00000479555 FUCA2Q9BTY2 467 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 ZNF700Q9H0M5 742 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 TNMDQ9H2S6 317 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 GPR35Q9HC97 309 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 RRP7BPQ9NSQ0 103 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 SERTAD3Q9UJW9 196 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 SMC3Q9UQE7 1217 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 FAM50BQ9Y247 325 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 AFG3L2Q9Y4W6 797 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 LRP12Q9Y561 859 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 RPGRIP1LQ68CZ1 1315 aa4.4□□□□□ -1.71
CMSS1-204ENST00000479555 ZNF644Q9H582 1327 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-204ENST00000479555 RGS12O14924 1447 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 FAM135BQ49AJ0 1406 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 C9orf84Q5VXU9 1444 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 ENO4A6NNW6 628 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 ISM1B1AKI9 464 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 MYO1FO00160 1098 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 FOXN3O00409 490 aaPredicted RBP4.39□□□□□ -1.71
CMSS1-204ENST00000479555 PQBP1O60828 265 aaKnown RBP4.39□□□□□ -1.71
CMSS1-204ENST00000479555 CHEK2O96017 543 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 RARBP10826 455 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 MYF5P13349 255 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 RPS6KA3P51812 740 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 CLNS1AP54105 237 aaKnown RBP4.39□□□□□ -1.71
CMSS1-204ENST00000479555 NLRP5P59047 1200 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 IFIT5Q13325 482 aaKnown RBP4.39□□□□□ -1.71
CMSS1-204ENST00000479555 SEMA5AQ13591 1074 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 KIF22Q14807 665 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 SNCBQ16143 134 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 CEP85LQ5SZL2 805 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 ANKRD45Q5TZF3 282 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 ATL3Q6DD88 541 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 FCRL6Q6DN72 434 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 CYB5RLQ6IPT4 315 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 ANKRD16Q6P6B7 361 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 PPP1R32Q7Z5V6 425 aa4.39□□□□□ -1.71
CMSS1-204ENST00000479555 ITPRIPQ8IWB1 547 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms