RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 ACADMP11310 421 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 MATKP42679 507 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 ADAM9Q13443 819 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 SUZ12Q15022 739 aaKnown RBP13.92□□□□□ -0.18
ABCF1-206ENST00000479542 ZCWPW2Q504Y3 356 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 MPP7Q5T2T1 576 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 DCAF12L1Q5VU92 463 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 TMPRSS7Q7RTY8 843 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 PIGZQ86VD9 579 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 FAM186BQ8IYM0 893 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.92□□□□□ -0.18
ABCF1-206ENST00000479542 ZNF557Q8N988 423 aaPredicted RBP13.92□□□□□ -0.18
ABCF1-206ENST00000479542 SLC4A11Q8NBS3 891 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 OR2I1PQ8NGU4 316 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 OR2T3Q8NH03 318 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 HEXIM2Q96MH2 286 aaKnown RBP13.92□□□□□ -0.18
ABCF1-206ENST00000479542 CAMK1GQ96NX5 476 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 TMEM245Q9H330 911 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 CD93Q9NPY3 652 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 TM7SF3Q9NS93 570 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 RAB20Q9NX57 234 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 COQ4Q9Y3A0 265 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 GPSM3Q9Y4H4 160 aa13.92□□□□□ -0.18
ABCF1-206ENST00000479542 ANKRD11Q6UB99 2663 aaPredicted RBP13.92□□□□□ -0.18
ABCF1-206ENST00000479542 E9PAM4 449 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 DFNA5O60443 496 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 ZBED1O96006 694 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 PFKFB1P16118 471 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 MAOBP27338 520 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 HARS2P49590 506 aaKnown RBP13.91□□□□□ -0.18
ABCF1-206ENST00000479542 AFF3P51826 1226 aaKnown RBP13.91□□□□□ -0.18
ABCF1-206ENST00000479542 RAD23BP54727 409 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 YWHAGP61981 247 aaKnown RBP eCLIP13.91□□□□□ -0.18
ABCF1-206ENST00000479542 DNM1Q05193 864 aaKnown RBP13.91□□□□□ -0.18
ABCF1-206ENST00000479542 SCAPQ12770 1279 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 EFEMP1Q12805 493 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 ACAP1Q15027 740 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 TMEM215Q68D42 235 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 DENND1CQ8IV53 801 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 FBXL13Q8NEE6 735 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 AZIN2Q96A70 460 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 GAREM1Q9H706 876 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 CISHQ9NSE2 258 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 RASAL2Q9UJF2 1139 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 KIAA1257Q9ULG3 409 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 PLA2G4CQ9UP65 541 aa13.91□□□□□ -0.18
ABCF1-206ENST00000479542 DSPP15924 2871 aaKnown RBP13.91□□□□□ -0.18
ABCF1-206ENST00000479542 CABIN1Q9Y6J0 2220 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 XPO1O14980 1071 aaKnown RBP13.9□□□□□ -0.18
ABCF1-206ENST00000479542 PCDHGA12O60330 932 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 CD58P19256 250 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 HOXD9P28356 352 aaPredicted RBP13.9□□□□□ -0.18
ABCF1-206ENST00000479542 GRIA4P48058 902 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 BNC1Q01954 994 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 DPYDQ12882 1025 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 COL9A2Q14055 689 aaPredicted RBP13.9□□□□□ -0.18
ABCF1-206ENST00000479542 HLA-BQ31612 363 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 ADGRF1Q5T601 910 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 SERPINA13PQ6UXR4 307 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 RSRC2Q7L4I2 434 aaKnown RBP13.9□□□□□ -0.18
ABCF1-206ENST00000479542 BHLHA9Q7RTU4 235 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 SLCO6A1Q86UG4 719 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 GALNT15Q8N3T1 639 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 DDI1Q8WTU0 396 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 KCTD13Q8WZ19 329 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 GOLGA1Q92805 767 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 BHMTQ93088 406 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 CCDC86Q9H6F5 360 aaKnown RBP13.9□□□□□ -0.18
ABCF1-206ENST00000479542 SCUBE2Q9NQ36 999 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 ABCC13Q9NSE7 274 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 CLEC4EQ9ULY5 219 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 SCML1Q9UN30 329 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 FASNP49327 2511 aaKnown RBP13.9□□□□□ -0.18
ABCF1-206ENST00000479542 PLXNB3Q9ULL4 1909 aa13.9□□□□□ -0.18
ABCF1-206ENST00000479542 ACACAQ13085 2346 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 KNL1Q8NG31 2342 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.89□□□□□ -0.19
ABCF1-206ENST00000479542 A0A1B0GVL5 298 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 SLC12A8A0AV02 714 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 IRAK2O43187 625 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 TSPAN3O60637 253 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 EPHX1P07099 455 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 TRIM49P0CI25 452 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 TRIM49CP0CI26 452 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 PRKCHP24723 683 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 HLA-FP30511 346 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 SYKP43405 635 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 TKTL1P51854 596 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 BCAT1P54687 386 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 ARID5BQ14865 1188 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 TEAD4Q15561 434 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 COBLL1Q53SF7 1204 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 ZCCHC9Q8N567 271 aaKnown RBP13.89□□□□□ -0.19
ABCF1-206ENST00000479542 KDM1BQ8NB78 822 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 SEMA4DQ92854 862 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 JAKMIP2Q96AA8 810 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 TMA16Q96EY4 203 aaKnown RBP13.89□□□□□ -0.19
ABCF1-206ENST00000479542 SGK2Q9HBY8 427 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 TOR4AQ9NXH8 423 aa13.89□□□□□ -0.19
ABCF1-206ENST00000479542 SUN2Q9UH99 717 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms