RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 AK5Q9Y6K8 562 aa16.87■□□□□ 0.29
DDX56-210ENST00000479440 TSPAN3O60637 253 aa16.86■□□□□ 0.29
DDX56-210ENST00000479440 VNN1O95497 513 aa16.86■□□□□ 0.29
DDX56-210ENST00000479440 C4BPAP04003 597 aaKnown RBP16.86■□□□□ 0.29
DDX56-210ENST00000479440 RPN1P04843 607 aaKnown RBP16.86■□□□□ 0.29
DDX56-210ENST00000479440 HMBSP08397 361 aa16.86■□□□□ 0.29
DDX56-210ENST00000479440 KIF11P52732 1056 aa16.86■□□□□ 0.29
DDX56-210ENST00000479440 CLDN10P78369 228 aa16.86■□□□□ 0.29
DDX56-210ENST00000479440 UNC13DQ70J99 1090 aa16.86■□□□□ 0.29
DDX56-210ENST00000479440 ZNF605Q86T29 641 aa16.86■□□□□ 0.29
DDX56-210ENST00000479440 PLEKHO2Q8TD55 490 aa16.86■□□□□ 0.29
DDX56-210ENST00000479440 PARD3BQ8TEW8 1205 aa16.86■□□□□ 0.29
DDX56-210ENST00000479440 SKA1Q96BD8 255 aa16.86■□□□□ 0.29
DDX56-210ENST00000479440 ELMO3Q96BJ8 720 aa16.86■□□□□ 0.29
DDX56-210ENST00000479440 PLA2G4CQ9UP65 541 aa16.86■□□□□ 0.29
DDX56-210ENST00000479440 TMEM131Q92545 1883 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 A0A1B0GTQ1 180 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 TEX51A0A1B0GUA7 166 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 CAPN8A6NHC0 703 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 KCNK3O14649 394 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 YKT6O15498 198 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 TLX3O43711 291 aaPredicted RBP16.85■□□□□ 0.29
DDX56-210ENST00000479440 LDOC1O95751 146 aaPredicted RBP16.85■□□□□ 0.29
DDX56-210ENST00000479440 C1SP09871 688 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 C7P10643 843 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 PIK3CAP42336 1068 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 ASPAP45381 313 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 SEMG2Q02383 582 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 PDE4CQ08493 712 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 INCA1Q0VD86 236 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 EFEMP1Q12805 493 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 SLC39A14Q15043 492 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 E2F4Q16254 413 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 TMEM215Q68D42 235 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 RSRC2Q7L4I2 434 aaKnown RBP16.85■□□□□ 0.29
DDX56-210ENST00000479440 SCD5Q86SK9 330 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 DENND1CQ8IV53 801 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 FAM217AQ8IXS0 508 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 ARHGAP18Q8N392 663 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 SNIP1Q8TAD8 396 aaKnown RBP16.85■□□□□ 0.29
DDX56-210ENST00000479440 GOLGA1Q92805 767 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 PLD4Q96BZ4 506 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 DHX58Q96C10 678 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 CYFIP2Q96F07 1278 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 CNDP2Q96KP4 475 aaKnown RBP16.85■□□□□ 0.29
DDX56-210ENST00000479440 ELF4Q99607 663 aaPredicted RBP16.85■□□□□ 0.29
DDX56-210ENST00000479440 NT5C1AQ9BXI3 368 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 IMPG2Q9BZV3 1241 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 NRSN2Q9GZP1 204 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 TMEM245Q9H330 911 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 MAGEF1Q9HAY2 307 aa16.85■□□□□ 0.29
DDX56-210ENST00000479440 URB1O60287 2271 aaKnown RBP16.85■□□□□ 0.29
DDX56-210ENST00000479440 VILLO15195 856 aa16.84■□□□□ 0.29
DDX56-210ENST00000479440 KIF20AO95235 890 aa16.84■□□□□ 0.29
DDX56-210ENST00000479440 ZNF445P59923 1031 aa16.84■□□□□ 0.29
DDX56-210ENST00000479440 RACK1P63244 317 aaKnown RBP16.84■□□□□ 0.29
DDX56-210ENST00000479440 KNOP1Q1ED39 458 aaKnown RBP16.84■□□□□ 0.29
DDX56-210ENST00000479440 ZACNQ401N2 412 aa16.84■□□□□ 0.29
DDX56-210ENST00000479440 C8orf34Q49A92 452 aa16.84■□□□□ 0.29
DDX56-210ENST00000479440 MPPE1Q53F39 396 aa16.84■□□□□ 0.29
DDX56-210ENST00000479440 ZNF776Q68DI1 518 aaPredicted RBP16.84■□□□□ 0.29
DDX56-210ENST00000479440 FAM173BQ6P4H8 233 aa16.84■□□□□ 0.29
DDX56-210ENST00000479440 USP28Q96RU2 1077 aa16.84■□□□□ 0.29
DDX56-210ENST00000479440 C7orf25Q9BPX7 421 aa16.84■□□□□ 0.29
DDX56-210ENST00000479440 MARCH2Q9P0N8 246 aa16.84■□□□□ 0.29
DDX56-210ENST00000479440 CLEC4EQ9ULY5 219 aa16.84■□□□□ 0.29
DDX56-210ENST00000479440 RAI2Q9Y5P3 530 aa16.84■□□□□ 0.29
DDX56-210ENST00000479440 USP3Q9Y6I4 520 aa16.84■□□□□ 0.29
DDX56-210ENST00000479440 SETXQ7Z333 2677 aaKnown RBP16.83■□□□□ 0.29
DDX56-210ENST00000479440 SLC12A8A0AV02 714 aa16.83■□□□□ 0.28
DDX56-210ENST00000479440 ASS1P00966 412 aaKnown RBP16.83■□□□□ 0.28
DDX56-210ENST00000479440 ITGAVP06756 1048 aa16.83■□□□□ 0.28
DDX56-210ENST00000479440 ABCB4P21439 1286 aa16.83■□□□□ 0.28
DDX56-210ENST00000479440 HOXD9P28356 352 aaPredicted RBP16.83■□□□□ 0.28
DDX56-210ENST00000479440 RPS14P62263 151 aaKnown RBP16.83■□□□□ 0.28
DDX56-210ENST00000479440 EHHADHQ08426 723 aa16.83■□□□□ 0.28
DDX56-210ENST00000479440 RTP5Q14D33 572 aa16.83■□□□□ 0.28
DDX56-210ENST00000479440 HES3Q5TGS1 186 aa16.83■□□□□ 0.28
DDX56-210ENST00000479440 KIAA0895LQ68EN5 471 aa16.83■□□□□ 0.28
DDX56-210ENST00000479440 GPR155Q7Z3F1 870 aa16.83■□□□□ 0.28
DDX56-210ENST00000479440 AHI1Q8N157 1196 aa16.83■□□□□ 0.28
DDX56-210ENST00000479440 ZNF843Q8N446 348 aa16.83■□□□□ 0.28
DDX56-210ENST00000479440 IQUBQ8NA54 791 aa16.83■□□□□ 0.28
DDX56-210ENST00000479440 TWNKQ96RR1 684 aa16.83■□□□□ 0.28
DDX56-210ENST00000479440 ASH1LQ9NR48 2969 aaKnown RBP16.83■□□□□ 0.28
DDX56-210ENST00000479440 NCKAP1Q9Y2A7 1128 aa16.83■□□□□ 0.28
DDX56-210ENST00000479440 MYH10P35580 1976 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 HLA-FP30511 346 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 ACADVLP49748 655 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 SFSWAPQ12872 951 aaKnown RBP16.82■□□□□ 0.28
DDX56-210ENST00000479440 STK38Q15208 465 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 KCNT1Q5JUK3 1230 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 SPOPLQ6IQ16 392 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 CHST9Q7L1S5 443 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 GATAD2AQ86YP4 633 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 ZNF366Q8N895 744 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 CYB5D2Q8WUJ1 264 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 SLC6A18Q96N87 628 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 DUSP16Q9BY84 665 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 UPF2Q9HAU5 1272 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms