RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 EHD2Q9NZN4 543 aa12.9□□□□□ -0.34
HDAC8-217ENST00000478743 TJP2Q9UDY2 1190 aa12.9□□□□□ -0.34
HDAC8-217ENST00000478743 NUDT5Q9UKK9 219 aa12.9□□□□□ -0.34
HDAC8-217ENST00000478743 AGO2Q9UKV8 859 aaKnown RBP12.9□□□□□ -0.34
HDAC8-217ENST00000478743 ENTPD2Q9Y5L3 495 aa12.9□□□□□ -0.34
HDAC8-217ENST00000478743 CRYBG3Q68DQ2 2970 aa12.9□□□□□ -0.35
HDAC8-217ENST00000478743 FFAR2O15552 330 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 CYP26A1O43174 497 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 JAK2O60674 1132 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 RTN2O75298 545 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 PSMA5P28066 241 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 RBMS1P29558 406 aaKnown RBP12.89□□□□□ -0.35
HDAC8-217ENST00000478743 AFMP43652 599 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 TUBP50607 506 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 ZRSR1Q15695 479 aaKnown RBP12.89□□□□□ -0.35
HDAC8-217ENST00000478743 ANKS1BQ7Z6G8 1248 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 CLEC14AQ86T13 490 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 PDZD8Q8NEN9 1154 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 ZNF564Q8TBZ8 553 aaPredicted RBP12.89□□□□□ -0.35
HDAC8-217ENST00000478743 OVCA2Q8WZ82 227 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 REEP2Q9BRK0 252 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 FUCA2Q9BTY2 467 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 SGK2Q9HBY8 427 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 PRSS16Q9NQE7 514 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 CENPEQ02224 2701 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 OTOGQ6ZRI0 2925 aa12.89□□□□□ -0.35
HDAC8-217ENST00000478743 TLR4O00206 839 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 NPC1O15118 1278 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 LZTS3O60299 673 aaPredicted RBP12.88□□□□□ -0.35
HDAC8-217ENST00000478743 PFKFB2O60825 505 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 KLKB1P03952 638 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 TGM2P21980 687 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 WARSP23381 471 aaKnown RBP12.88□□□□□ -0.35
HDAC8-217ENST00000478743 COL8A1P27658 744 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 PPP2CBP62714 309 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 PPP2CAP67775 309 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 ZNF211Q13398 564 aaPredicted RBP12.88□□□□□ -0.35
HDAC8-217ENST00000478743 SGO2Q562F6 1265 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 NECAB1Q8N987 351 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 SYT2Q8N9I0 419 aaPredicted RBP12.88□□□□□ -0.35
HDAC8-217ENST00000478743 UCMAQ8WVF2 138 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 SAAL1Q96ER3 474 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 NACA2Q9H009 215 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 STYXL1Q9Y6J8 313 aa12.88□□□□□ -0.35
HDAC8-217ENST00000478743 SCN8AQ9UQD0 1980 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 TNFSF15O95150 251 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 IL18RAPO95256 599 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 DNTTP04053 509 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-217ENST00000478743 ASIC1P78348 528 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 EHHADHQ08426 723 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 FNDC3BQ53EP0 1204 aaKnown RBP12.87□□□□□ -0.35
HDAC8-217ENST00000478743 BMP2KLQ5H9B9 411 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 XKR5Q6UX68 686 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 VASH2Q86V25 355 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 BRSK2Q8IWQ3 736 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 OR4C6Q8NH72 309 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 CCDC97Q96F63 343 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-217ENST00000478743 SERAC1Q96JX3 654 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 FAM213AQ9BRX8 229 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.87□□□□□ -0.35
HDAC8-217ENST00000478743 IL37Q9NZH6 218 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 LARSQ9P2J5 1176 aaKnown RBP12.87□□□□□ -0.35
HDAC8-217ENST00000478743 ITGA11Q9UKX5 1188 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 CA5BQ9Y2D0 317 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 PCDHGA4Q9Y5G9 962 aa12.87□□□□□ -0.35
HDAC8-217ENST00000478743 A0A1W2PP55 124 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 A1L4Q6 167 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 FAM92AA1XBS5 289 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 STC2O76061 302 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 RTN3O95197 1032 aaPredicted RBP12.86□□□□□ -0.35
HDAC8-217ENST00000478743 PLA2G4BP0C869 781 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 CKMT1AP12532 417 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 CASRP41180 1078 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 PDX1P52945 283 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 MAPRE1Q15691 268 aaKnown RBP12.86□□□□□ -0.35
HDAC8-217ENST00000478743 CRTC1Q6UUV9 634 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 PAQR9Q6ZVX9 377 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 ZMIZ2Q8NF64 920 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 OR5B17Q8NGF7 314 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 ARRDC3Q96B67 414 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 PHF12Q96QT6 1004 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 ELOVL4Q9GZR5 314 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 NEUROG2Q9H2A3 272 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 PABPC3Q9H361 631 aaKnown RBP12.86□□□□□ -0.35
HDAC8-217ENST00000478743 ERVMER34-1Q9H9K5 563 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 NMUR1Q9HB89 426 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 GEMIN8Q9NWZ8 242 aaKnown RBP12.86□□□□□ -0.35
HDAC8-217ENST00000478743 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.86□□□□□ -0.35
HDAC8-217ENST00000478743 LSM7Q9UK45 103 aaKnown RBP12.86□□□□□ -0.35
HDAC8-217ENST00000478743 PCDHGA8Q9Y5G5 932 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 CYP46A1Q9Y6A2 500 aa12.86□□□□□ -0.35
HDAC8-217ENST00000478743 ZFHX3Q15911 3703 aa12.85□□□□□ -0.35
HDAC8-217ENST00000478743 GOLGA8IPA6NC78 632 aa12.85□□□□□ -0.35
HDAC8-217ENST00000478743 GOLGA8JA6NMD2 632 aa12.85□□□□□ -0.35
HDAC8-217ENST00000478743 H0YCG3 227 aa12.85□□□□□ -0.35
HDAC8-217ENST00000478743 MID1O15344 667 aa12.85□□□□□ -0.35
HDAC8-217ENST00000478743 CDC45O75419 566 aa12.85□□□□□ -0.35
HDAC8-217ENST00000478743 BEST1O76090 585 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms