RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 COBLL1Q53SF7 1204 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 WDR45BQ5MNZ6 344 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 ANKRD40Q6AI12 368 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 RSRC2Q7L4I2 434 aaKnown RBP17.47■□□□□ 0.39
TRIM13-208ENST00000478111 FMNL3Q8IVF7 1028 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 FMR1NBQ8N0W7 255 aaPredicted RBP17.47■□□□□ 0.39
TRIM13-208ENST00000478111 DDI1Q8WTU0 396 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 UCMAQ8WVF2 138 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 CAMK1GQ96NX5 476 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 GPR174Q9BXC1 333 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 SUSD2Q9UGT4 822 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 STOML2Q9UJZ1 356 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 MSRB2Q9Y3D2 182 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 NFE2L3Q9Y4A8 694 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 PLXNB3Q9ULL4 1909 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 ATRXP46100 2492 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 FAM221BA6H8Z2 402 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 YJEFN3A6XGL0 299 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 E7ENQ6 273 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 SLC16A3O15427 465 aaKnown RBP17.46■□□□□ 0.39
TRIM13-208ENST00000478111 SH3BP5O60239 455 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 GABBR2O75899 941 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 CYBBP04839 570 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 C7P10643 843 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 NCAM1P13591 858 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 BCAT1P54687 386 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 SLC8A3P57103 927 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 GRIK2Q13002 908 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 SLC14A1Q13336 389 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 PKDCCQ504Y2 493 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 SGO2Q562F6 1265 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 CADM4Q8NFZ8 388 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 UBA3Q8TBC4 463 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 SLC35C1Q96A29 364 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 SIPA1Q96FS4 1042 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 SFMBT1Q9UHJ3 866 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 HBS1LQ9Y450 684 aaKnown RBP17.46■□□□□ 0.39
TRIM13-208ENST00000478111 CELSR3Q9NYQ7 3312 aa17.46■□□□□ 0.39
TRIM13-208ENST00000478111 TMEM8BA6NDV4 472 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 O00370 1275 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 TSPAN3O60637 253 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 GNSP15586 552 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 HLA-FP30511 346 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 ADIGQ0VDE8 80 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 BST2Q10589 180 aaKnown RBP17.45■□□□□ 0.38
TRIM13-208ENST00000478111 MPPE1Q53F39 396 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 DCAF17Q5H9S7 520 aaPredicted RBP17.45■□□□□ 0.38
TRIM13-208ENST00000478111 ZNF658Q5TYW1 1059 aaPredicted RBP17.45■□□□□ 0.38
TRIM13-208ENST00000478111 TCERG1LQ5VWI1 586 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 BSPRYQ5W0U4 402 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 C1orf216Q8TAB5 229 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 SPATA20Q8TB22 786 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 KCTD13Q8WZ19 329 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 EDEM1Q92611 657 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 PRCCQ92733 491 aaPredicted RBP17.45■□□□□ 0.38
TRIM13-208ENST00000478111 CIPCQ9C0C6 399 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 LRRC4Q9HBW1 653 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 OLA1Q9NTK5 396 aaKnown RBP17.45■□□□□ 0.38
TRIM13-208ENST00000478111 ATP6V1DQ9Y5K8 247 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 TMEM131Q92545 1883 aa17.45■□□□□ 0.38
TRIM13-208ENST00000478111 PTPRBP23467 1997 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 A0A1B0GTW7 788 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 TRIM49BA6NDI0 452 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 METTL12A8MUP2 240 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 TIMM44O43615 452 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 SYNCRIPO60506 623 aaKnown RBP17.44■□□□□ 0.38
TRIM13-208ENST00000478111 EPHX1P07099 455 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 VDRP11473 427 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 HLA-EP13747 358 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 OXTRP30559 389 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 FKBP3Q00688 224 aaKnown RBP17.44■□□□□ 0.38
TRIM13-208ENST00000478111 BNC1Q01954 994 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 LRMPQ12912 555 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 HNRNPDQ14103 355 aaKnown RBP17.44■□□□□ 0.38
TRIM13-208ENST00000478111 DCAF12L1Q5VU92 463 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 RAB44Q7Z6P3 723 aaPredicted RBP17.44■□□□□ 0.38
TRIM13-208ENST00000478111 KIAA0907Q7Z7F0 614 aaPredicted RBP17.44■□□□□ 0.38
TRIM13-208ENST00000478111 SCML4Q8N228 414 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 CHCHD4Q8N4Q1 142 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 ZCCHC9Q8N567 271 aaKnown RBP17.44■□□□□ 0.38
TRIM13-208ENST00000478111 ENGASEQ8NFI3 743 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 TFAP2BQ92481 460 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 GSDMAQ96QA5 445 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 ZSWIM1Q9BR11 485 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 TMEM245Q9H330 911 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 RMND1Q9NWS8 449 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 HESX1Q9UBX0 185 aa17.44■□□□□ 0.38
TRIM13-208ENST00000478111 SRRM3A6NNA2 597 aaPredicted RBP17.43■□□□□ 0.38
TRIM13-208ENST00000478111 H0Y626 953 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 TRIM16O95361 564 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 CAPNS1P04632 268 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 CD19P15391 556 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 HARS2P49590 506 aaKnown RBP17.43■□□□□ 0.38
TRIM13-208ENST00000478111 SGSHP51688 502 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 DAOAP59103 153 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 CAMK2GQ13555 558 aaPredicted RBP17.43■□□□□ 0.38
TRIM13-208ENST00000478111 E2F5Q15329 346 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 TRIP6Q15654 476 aaKnown RBP17.43■□□□□ 0.38
TRIM13-208ENST00000478111 PTPRNQ16849 979 aa17.43■□□□□ 0.38
TRIM13-208ENST00000478111 ADGRF1Q5T601 910 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms