RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 KCTD13Q8WZ19 329 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 PLD4Q96BZ4 506 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 RMDN1Q96DB5 314 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 ACOX2Q99424 681 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 TUBGCP2Q9BSJ2 902 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 LSM14BQ9BX40 385 aaKnown RBP8.65□□□□□ -1.02
ERCC8-205ENST00000477893 DCLK3Q9C098 648 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 ARRDC1-AS1Q9H2J1 176 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 PLCB1Q9NQ66 1216 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 CNGB3Q9NQW8 809 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 ABCC13Q9NSE7 274 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 CACNA2D2Q9NY47 1150 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 MARK1Q9P0L2 795 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 COX16Q9P0S2 106 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 WDR35Q9P2L0 1181 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 TJP2Q9UDY2 1190 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 CYTH4Q9UIA0 394 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 FCF1Q9Y324 198 aaKnown RBP8.65□□□□□ -1.02
ERCC8-205ENST00000477893 RAD54BQ9Y620 910 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 DMXL1Q9Y485 3027 aa8.65□□□□□ -1.02
ERCC8-205ENST00000477893 GOLGA6L7A0A1B0GV03 622 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 BECN2A8MW95 431 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 PRRT4C9JH25 899 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 E5RJQ4 531 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 GOLGA6L22H0YM25 854 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 CAPN9O14815 690 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 ALDH1A2O94788 518 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 CYBBP04839 570 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 RETP07949 1114 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 HOXB2P14652 356 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 ERCC5P28715 1186 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-205ENST00000477893 HOXA6P31267 233 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 CNR2P34972 360 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 TNFRSF4P43489 277 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 KIR2DL1P43626 348 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-205ENST00000477893 HARS2P49590 506 aaKnown RBP8.64□□□□□ -1.03
ERCC8-205ENST00000477893 SGSHP51688 502 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 MRPS21P82921 87 aaKnown RBP8.64□□□□□ -1.03
ERCC8-205ENST00000477893 CREB5Q02930 508 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 SF3A2Q15428 464 aaKnown RBP8.64□□□□□ -1.03
ERCC8-205ENST00000477893 RSPO4Q2I0M5 234 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-205ENST00000477893 PLK5Q496M5 336 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 PREPLQ4J6C6 727 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-205ENST00000477893 EOGTQ5NDL2 527 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 FYB2Q5VWT5 728 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 TCEAL6Q6IPX3 200 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 RFWD3Q6PCD5 774 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 C11orf57Q6ZUT1 292 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-205ENST00000477893 ENOSF1Q7L5Y1 443 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 FRMD1Q8N878 549 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 C1orf131Q8NDD1 294 aaKnown RBP8.64□□□□□ -1.03
ERCC8-205ENST00000477893 DQX1Q8TE96 717 aaKnown RBP8.64□□□□□ -1.03
ERCC8-205ENST00000477893 ZNF606Q8WXB4 792 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 SORCS1Q8WY21 1168 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 TCEAL3Q969E4 200 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 CIPCQ9C0C6 399 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 SLC6A17Q9H1V8 727 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 NDST4Q9H3R1 872 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 POLMQ9NP87 494 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-205ENST00000477893 SIX2Q9NPC8 291 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 OLA1Q9NTK5 396 aaKnown RBP8.64□□□□□ -1.03
ERCC8-205ENST00000477893 SEMA4GQ9NTN9 838 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 DNAJC12Q9UKB3 198 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 HCN2Q9UL51 889 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 CLEC4EQ9ULY5 219 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 NAALADL1Q9UQQ1 740 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 ZNF510Q9Y2H8 683 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 NFE2L3Q9Y4A8 694 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 FHOD1Q9Y613 1164 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 DNAH14Q0VDD8 3507 aa8.64□□□□□ -1.03
ERCC8-205ENST00000477893 ATXN2Q99700 1313 aaKnown RBP8.63□□□□□ -1.03
ERCC8-205ENST00000477893 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.63□□□□□ -1.03
ERCC8-205ENST00000477893 WASH3PC4AMC7 463 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 GRAP2O75791 330 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 FBXO21O94952 628 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 PENKP01210 267 aaPredicted RBP8.63□□□□□ -1.03
ERCC8-205ENST00000477893 CISD3P0C7P0 127 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 CHKAP35790 457 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 GPD2P43304 727 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 DHPSP49366 369 aaPredicted RBP8.63□□□□□ -1.03
ERCC8-205ENST00000477893 NUMBP49757 651 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 KLK7P49862 253 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 TBX4P57082 545 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 ARID5AQ03989 594 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 PDCLQ13371 301 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 TAF5Q15542 800 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 TRIP4Q15650 581 aaPredicted RBP8.63□□□□□ -1.03
ERCC8-205ENST00000477893 ELF2Q15723 593 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 GEN1Q17RS7 908 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 AASDHQ4L235 1098 aaPredicted RBP8.63□□□□□ -1.03
ERCC8-205ENST00000477893 USP39Q53GS9 565 aaKnown RBP8.63□□□□□ -1.03
ERCC8-205ENST00000477893 TCP11X2Q5H9J9 407 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 MIIPQ5JXC2 388 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 TAF3Q5VWG9 929 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 SDE2Q6IQ49 451 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 KIAA1211LQ6NV74 962 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 SASS6Q6UVJ0 657 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 KIAA1324Q6UXG2 1013 aaKnown RBP8.63□□□□□ -1.03
ERCC8-205ENST00000477893 TRMT11Q7Z4G4 463 aaKnown RBP8.63□□□□□ -1.03
ERCC8-205ENST00000477893 ANKS1BQ7Z6G8 1248 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms