RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CCDC38Q502W7 563 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 ARMC3Q5W041 872 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 BTBD8Q5XKL5 378 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 MSANTD2Q6P1R3 559 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 RFX8Q6ZV50 586 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 TADA2BQ86TJ2 420 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 FAM131BQ86XD5 332 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 ZNF280BQ86YH2 543 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 CCNJLQ8IV13 435 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 UNC45BQ8IWX7 931 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 GPR65Q8IYL9 337 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 NUP93Q8N1F7 819 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 CRIPAKQ8N1N5 446 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 ZNF276Q8N554 614 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 CCDC185Q8N715 623 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 PYROXD1Q8WU10 500 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 CPT1BQ92523 772 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 ZNF775Q96BV0 537 aaPredicted RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 SPATA17Q96L03 361 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 SERPINB11Q96P15 392 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 CASD1Q96PB1 797 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 OLFM3Q96PB7 478 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 DEFB118Q96PH6 123 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 KCTD15Q96SI1 283 aaPredicted RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 CDK5RAP1Q96SZ6 601 aaKnown RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 KCNK16Q96T55 309 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 NAT9Q9BTE0 207 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 OSBPL7Q9BZF2 842 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 CRISPLD2Q9H0B8 497 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 RNF208Q9H0X6 261 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 CENPHQ9H3R5 247 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 SMOC2Q9H3U7 446 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 HIPK3Q9H422 1215 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 RETREG1Q9H6L5 497 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 XAB2Q9HCS7 855 aaKnown RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 WDR6Q9NNW5 1121 aaKnown RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 SAYSD1Q9NPB0 183 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 EIF2B3Q9NR50 452 aaKnown RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 ARHGEF4Q9NR80 690 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 OLA1Q9NTK5 396 aaKnown RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 DDIT4Q9NX09 232 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 CLIC5Q9NZA1 410 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.21□□□□□ -1.1
VMA21-203ENST00000477649 IL37Q9NZH6 218 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 BCCIPQ9P287 314 aaKnown RBP eCLIP8.21□□□□□ -1.1
VMA21-203ENST00000477649 ZMYND8Q9ULU4 1186 aaPredicted RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 MAFFQ9ULX9 164 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 NOVA2Q9UNW9 492 aaKnown RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 NAALADL1Q9UQQ1 740 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 SCML2Q9UQR0 700 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 HEY1Q9Y5J3 304 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 A0A0A0MRY4 1105 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 FAM92AA1XBS5 289 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 ERI2A8K979 691 aaKnown RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 TRDMT1O14717 391 aaKnown RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 TNFRSF10BO14763 440 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 PSMD3O43242 534 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 ACSL3O95573 720 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 ZSCAN5DPP0CG00 497 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 DNAJB2P25686 324 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 MMP13P45452 471 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 NDUFV1P49821 464 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 IRAK1P51617 712 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 SLC5A3P53794 718 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 TPI1P60174 286 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 MAGOHP61326 146 aaKnown RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 YWHAGP61981 247 aaKnown RBP eCLIP8.2□□□□□ -1.1
VMA21-203ENST00000477649 RPL10AP62906 217 aaKnown RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 BASP1P80723 227 aaKnown RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 PDIA2Q13087 525 aaKnown RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 SEMA3BQ13214 749 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 NME3Q13232 169 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 GPR17Q13304 367 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 EIF4EBP2Q13542 120 aaPredicted RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 DPYSQ14117 519 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 IKBKEQ14164 716 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 KCNJ11Q14654 390 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 PRKD1Q15139 912 aaPredicted RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 PKN2Q16513 984 aaKnown RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 KYNUQ16719 465 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 CA9Q16790 459 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 CTXN3Q4LDR2 81 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 OTUD1Q5VV17 481 aaPredicted RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 SYPL2Q5VXT5 272 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 KCTD16Q68DU8 428 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 NCBP2-AS2Q69YL0 99 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 CNKSR3Q6P9H4 555 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 C1orf228Q6PIY5 440 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 SLC39A5Q6ZMH5 540 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 ARHGEF18Q6ZSZ5 1173 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 CYS1Q717R9 158 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 BHLHA9Q7RTU4 235 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 LRRTM3Q86VH5 581 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 ZC3H18Q86VM9 953 aaKnown RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 SPATS2Q86XZ4 545 aaKnown RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 OR2W6PQ8NHA6 318 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 SH3TC2Q8TF17 1288 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 HTR3CQ8WXA8 447 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 C1orf74Q96LT6 269 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 SPATA13Q96N96 652 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms