RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 RHOBTB1O94844 696 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 IGLV3-25P01717 112 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 GLI1P08151 1106 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 HOXB2P14652 356 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 P2RY2P41231 377 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 YWHAZP63104 245 aaKnown RBP22.64■■□□□ 1.21
COL9A3-211ENST00000477612 EIF4HQ15056 248 aaKnown RBP22.64■■□□□ 1.21
COL9A3-211ENST00000477612 E2F5Q15329 346 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 PLA2G2CQ5R387 149 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 SYPL2Q5VXT5 272 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 PMS2CLQ68D20 193 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 SDE2Q6IQ49 451 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 SLC47A2Q86VL8 602 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 CHPFQ8IZ52 775 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 FAM149B1Q96BN6 582 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 TMA16Q96EY4 203 aaKnown RBP22.64■■□□□ 1.21
COL9A3-211ENST00000477612 CPXM1Q96SM3 734 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 PLCB1Q9NQ66 1216 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 ANO10Q9NW15 660 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 ASNSD1Q9NWL6 643 aa22.64■■□□□ 1.21
COL9A3-211ENST00000477612 THAP10Q9P2Z0 257 aaPredicted RBP22.64■■□□□ 1.21
COL9A3-211ENST00000477612 TCRBV21S2A2A0A5A6 115 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 IRAK2O43187 625 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 ZNF806P0C7X5 589 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 UCHL3P15374 230 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 SDHBP21912 280 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 SLC11A2P49281 568 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 PUM1Q14671 1186 aaKnown RBP eCLIP22.63■■□□□ 1.21
COL9A3-211ENST00000477612 DRAP1Q14919 205 aaPredicted RBP22.63■■□□□ 1.21
COL9A3-211ENST00000477612 ELF2Q15723 593 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 FAM133BQ5BKY9 247 aaKnown RBP22.63■■□□□ 1.21
COL9A3-211ENST00000477612 PIK3R6Q5UE93 754 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 SASS6Q6UVJ0 657 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 PRR23CQ6ZRP0 262 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 ANKS1BQ7Z6G8 1248 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 KIAA0907Q7Z7F0 614 aaPredicted RBP22.63■■□□□ 1.21
COL9A3-211ENST00000477612 PPP1R13BQ96KQ4 1090 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 ARRDC1-AS1Q9H2J1 176 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 TJP2Q9UDY2 1190 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 FHOD1Q9Y613 1164 aa22.63■■□□□ 1.21
COL9A3-211ENST00000477612 TIMM44O43615 452 aa22.62■■□□□ 1.21
COL9A3-211ENST00000477612 TSPAN3O60637 253 aa22.62■■□□□ 1.21
COL9A3-211ENST00000477612 GABRG2P18507 467 aa22.62■■□□□ 1.21
COL9A3-211ENST00000477612 CDH5P33151 784 aaPredicted RBP22.62■■□□□ 1.21
COL9A3-211ENST00000477612 KRT9P35527 623 aa22.62■■□□□ 1.21
COL9A3-211ENST00000477612 BYSLQ13895 437 aaKnown RBP22.62■■□□□ 1.21
COL9A3-211ENST00000477612 KRT31Q15323 416 aa22.62■■□□□ 1.21
COL9A3-211ENST00000477612 MAP7D1Q3KQU3 841 aa22.62■■□□□ 1.21
COL9A3-211ENST00000477612 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.62■■□□□ 1.21
COL9A3-211ENST00000477612 IPO4Q8TEX9 1081 aaKnown RBP22.62■■□□□ 1.21
COL9A3-211ENST00000477612 ELOVL2Q9NXB9 296 aa22.62■■□□□ 1.21
COL9A3-211ENST00000477612 TAB2Q9NYJ8 693 aa22.62■■□□□ 1.21
COL9A3-211ENST00000477612 CAPN9O14815 690 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 PNMA6AP0CW24 399 aaPredicted RBP22.61■■□□□ 1.21
COL9A3-211ENST00000477612 HLA-FP30511 346 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 SLC6A4P31645 630 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 WASP42768 502 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 RSPO4Q2I0M5 234 aaPredicted RBP22.61■■□□□ 1.21
COL9A3-211ENST00000477612 CCDC183Q5T5S1 534 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 TMEM215Q68D42 235 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 NADSYN1Q6IA69 706 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 KIAA1211LQ6NV74 962 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 C11orf57Q6ZUT1 292 aaPredicted RBP22.61■■□□□ 1.21
COL9A3-211ENST00000477612 ERMP1Q7Z2K6 904 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 TAC4Q86UU9 113 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 UCMAQ8WVF2 138 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 HMGB4Q8WW32 186 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 NOX5Q96PH1 765 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 SLC2A13Q96QE2 648 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 STK33Q9BYT3 514 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 VPS16Q9H269 839 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 FANCLQ9NW38 375 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 CACNA2D2Q9NY47 1150 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 INVSQ9Y283 1065 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.61■■□□□ 1.21
COL9A3-211ENST00000477612 STON1Q9Y6Q2 735 aa22.61■■□□□ 1.21
COL9A3-211ENST00000477612 MUC22E2RYF6 1773 aaPredicted RBP22.61■■□□□ 1.21
COL9A3-211ENST00000477612 GOLGA6L7A0A1B0GV03 622 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 LRRC10BA6NIK2 292 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 WASH3PC4AMC7 463 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 PES1O00541 588 aaKnown RBP22.6■■□□□ 1.21
COL9A3-211ENST00000477612 TRUB2O95900 331 aaKnown RBP22.6■■□□□ 1.21
COL9A3-211ENST00000477612 CYP11B1P15538 503 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 BCKDHBP21953 392 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 SGSHP51688 502 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 SNX16P57768 344 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 TAF5Q15542 800 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 STX1AQ16623 288 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 EFHC1Q5JVL4 640 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 SPDYCQ5MJ68 293 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 PASD1Q8IV76 773 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 ZNF557Q8N988 423 aaPredicted RBP22.6■■□□□ 1.21
COL9A3-211ENST00000477612 C1orf131Q8NDD1 294 aaKnown RBP22.6■■□□□ 1.21
COL9A3-211ENST00000477612 WFIKKN2Q8TEU8 576 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 DDX50Q9BQ39 737 aaKnown RBP22.6■■□□□ 1.21
COL9A3-211ENST00000477612 LSM14BQ9BX40 385 aaKnown RBP22.6■■□□□ 1.21
COL9A3-211ENST00000477612 BCCIPQ9P287 314 aaKnown RBP eCLIP22.6■■□□□ 1.21
COL9A3-211ENST00000477612 DAAM1Q9Y4D1 1078 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 PI4KAP42356 2102 aa22.6■■□□□ 1.21
COL9A3-211ENST00000477612 BCLAF3A2AJT9 711 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms