RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 NUDT5Q9UKK9 219 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 PAXBP1Q9Y5B6 917 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 CAPN6Q9Y6Q1 641 aa18.38■□□□□ 0.53
SREBF1-211ENST00000476994 MACROD2A1Z1Q3 448 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 GRID2IPA4D2P6 1211 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 MDM4O15151 490 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 COCHO43405 550 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 BUB1BO60566 1050 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-211ENST00000476994 PROSCO94903 275 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 MOCS3O95396 460 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 TBX18O95935 607 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 C15orf59Q2T9L4 293 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-211ENST00000476994 SLC25A52Q3SY17 297 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 HECTD3Q5T447 861 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 SH3PXD2AQ5TCZ1 1133 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 TXNDC8Q6A555 127 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 TANGO2Q6ICL3 276 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 ERMP1Q7Z2K6 904 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 SLFN11Q7Z7L1 901 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 TAC4Q86UU9 113 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 GOLGA1Q92805 767 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 SMARCD2Q92925 531 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 E2F7Q96AV8 911 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 PGAP3Q96FM1 320 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-211ENST00000476994 TBCBQ99426 244 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 IRX2Q9BZI1 471 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-211ENST00000476994 RNF38Q9H0F5 515 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 GUCA1BQ9UMX6 200 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 ZNF292O60281 2723 aa18.37■□□□□ 0.53
SREBF1-211ENST00000476994 SOBPA7XYQ1 873 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 IRAK2O43187 625 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 RALAP11233 206 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 GLULP15104 373 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 PFKLP17858 780 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 PSMC3P17980 439 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 CD72P21854 359 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 SDC4P31431 198 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 MAN1A1P33908 653 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 RPS9P46781 194 aaKnown RBP18.36■□□□□ 0.53
SREBF1-211ENST00000476994 HDAC4P56524 1084 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 PPP2R5DQ14738 602 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 TEAD2Q15562 447 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 ARHGAP29Q52LW3 1261 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 FAM78AQ5JUQ0 283 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 C11orf63Q6NUN7 778 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 YAF2Q8IY57 180 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 DEPDC1BQ8WUY9 529 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 RUBCNQ92622 972 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 MRPS31Q92665 395 aaKnown RBP18.36■□□□□ 0.53
SREBF1-211ENST00000476994 ZFRQ96KR1 1074 aaKnown RBP18.36■□□□□ 0.53
SREBF1-211ENST00000476994 ASB16Q96NS5 453 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 SLC46A2Q9BY10 475 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 PLA2G2FQ9BZM2 168 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 ATXN3LQ9H3M9 355 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 GOLPH3Q9H4A6 298 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 HEBP1Q9NRV9 189 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 OLA1Q9NTK5 396 aaKnown RBP18.36■□□□□ 0.53
SREBF1-211ENST00000476994 RRN3Q9NYV6 651 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 MYOFQ9NZM1 2061 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 IP6K2Q9UHH9 426 aa18.36■□□□□ 0.53
SREBF1-211ENST00000476994 MYO1FO00160 1098 aa18.35■□□□□ 0.53
SREBF1-211ENST00000476994 CAPN9O14815 690 aa18.35■□□□□ 0.53
SREBF1-211ENST00000476994 TRUB2O95900 331 aaKnown RBP18.35■□□□□ 0.53
SREBF1-211ENST00000476994 PSMA2P25787 234 aa18.35■□□□□ 0.53
SREBF1-211ENST00000476994 NOP2P46087 812 aaKnown RBP18.35■□□□□ 0.53
SREBF1-211ENST00000476994 SULT1E1P49888 294 aa18.35■□□□□ 0.53
SREBF1-211ENST00000476994 CSTF1Q05048 431 aaKnown RBP18.35■□□□□ 0.53
SREBF1-211ENST00000476994 GRM2Q14416 872 aa18.35■□□□□ 0.53
SREBF1-211ENST00000476994 CYP4V2Q6ZWL3 525 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-211ENST00000476994 STRADAQ7RTN6 431 aa18.35■□□□□ 0.53
SREBF1-211ENST00000476994 CALR3Q96L12 384 aaKnown RBP18.35■□□□□ 0.53
SREBF1-211ENST00000476994 GCNAQ96QF7 691 aa18.35■□□□□ 0.53
SREBF1-211ENST00000476994 TASP1Q9H6P5 420 aa18.35■□□□□ 0.53
SREBF1-211ENST00000476994 SFMBT1Q9UHJ3 866 aa18.35■□□□□ 0.53
SREBF1-211ENST00000476994 STAP1Q9ULZ2 295 aa18.35■□□□□ 0.53
SREBF1-211ENST00000476994 MTF2Q9Y483 593 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-211ENST00000476994 PCDHGA2Q9Y5H1 932 aa18.35■□□□□ 0.53
SREBF1-211ENST00000476994 GOLGA6L9A6NEM1 432 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 LRCH4O75427 683 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 IGLV3-27P01718 113 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 TCF4P15884 667 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 DDX6P26196 483 aaKnown RBP eCLIP18.34■□□□□ 0.53
SREBF1-211ENST00000476994 TARSP26639 723 aaKnown RBP18.34■□□□□ 0.53
SREBF1-211ENST00000476994 GDI1P31150 447 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 ATXN1P54253 815 aaKnown RBP18.34■□□□□ 0.53
SREBF1-211ENST00000476994 ZXDBP98169 803 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 ATP11AP98196 1134 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 EFEMP1Q12805 493 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 NNTQ13423 1086 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 PIGHQ14442 188 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-211ENST00000476994 MESDQ14696 234 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 ACAP1Q15027 740 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 C10orf120Q5SQS8 335 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 DAB2IPQ5VWQ8 1189 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 ZSCAN18Q8TBC5 510 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-211ENST00000476994 ADAM32Q8TC27 787 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 CSGALNACT1Q8TDX6 532 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 RNF139Q8WU17 664 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 FAM172AQ8WUF8 416 aa18.34■□□□□ 0.53
SREBF1-211ENST00000476994 CLDN23Q96B33 292 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms