RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 E7ENQ6 273 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 SLC16A3O15427 465 aaKnown RBP13.71□□□□□ -0.21
MRPL55-228ENST00000476267 SH3BP5O60239 455 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 STX10O60499 249 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 CBFA2T3O75081 653 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 GABBR2O75899 941 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 EPB41P11171 864 aaKnown RBP13.71□□□□□ -0.21
MRPL55-228ENST00000476267 HLA-FP30511 346 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 PRCPP42785 496 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 PMS1P54277 932 aaKnown RBP13.71□□□□□ -0.21
MRPL55-228ENST00000476267 BCAT1P54687 386 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 CUL2Q13617 745 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 HNRNPDQ14103 355 aaKnown RBP13.71□□□□□ -0.21
MRPL55-228ENST00000476267 GOLGA7BQ2TAP0 167 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 RGL4Q8IZJ4 473 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.71□□□□□ -0.21
MRPL55-228ENST00000476267 SPATA20Q8TB22 786 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 UCMAQ8WVF2 138 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 KCTD13Q8WZ19 329 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 SLC35C1Q96A29 364 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 SIPA1Q96FS4 1042 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 GPR174Q9BXC1 333 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 TMEM245Q9H330 911 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 STRIP2Q9ULQ0 834 aa13.71□□□□□ -0.21
MRPL55-228ENST00000476267 PCNX2A6NKB5 2137 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 NYNRINQ9P2P1 1898 aaKnown RBP13.7□□□□□ -0.22
MRPL55-228ENST00000476267 NBEAQ8NFP9 2946 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 METTL12A8MUP2 240 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 O00370 1275 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 CETN3O15182 167 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 LATS1O95835 1130 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 IGLV3-27P01718 113 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 CYBBP04839 570 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 GNSP15586 552 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 ADIGQ0VDE8 80 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 BST2Q10589 180 aaKnown RBP13.7□□□□□ -0.22
MRPL55-228ENST00000476267 PNOCQ13519 176 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 CAMK2GQ13555 558 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-228ENST00000476267 PTPRNQ16849 979 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 ZNF423Q2M1K9 1284 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 MPPE1Q53F39 396 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 DCAF12L1Q5VU92 463 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 RSRC2Q7L4I2 434 aaKnown RBP13.7□□□□□ -0.22
MRPL55-228ENST00000476267 FMNL3Q8IVF7 1028 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 NAXDQ8IW45 347 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 FMR1NBQ8N0W7 255 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-228ENST00000476267 CHCHD4Q8N4Q1 142 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 ZCCHC9Q8N567 271 aaKnown RBP13.7□□□□□ -0.22
MRPL55-228ENST00000476267 BAHD1Q8TBE0 780 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-228ENST00000476267 DDI1Q8WTU0 396 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 ZCCHC14Q8WYQ9 949 aaKnown RBP13.7□□□□□ -0.22
MRPL55-228ENST00000476267 PRCCQ92733 491 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-228ENST00000476267 ZDHHC5Q9C0B5 715 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 OLA1Q9NTK5 396 aaKnown RBP13.7□□□□□ -0.22
MRPL55-228ENST00000476267 SFMBT1Q9UHJ3 866 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 HBS1LQ9Y450 684 aaKnown RBP13.7□□□□□ -0.22
MRPL55-228ENST00000476267 PLXNB3Q9ULL4 1909 aa13.7□□□□□ -0.22
MRPL55-228ENST00000476267 MEI4A8MW99 385 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 TIMM44O43615 452 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 EPHX1P07099 455 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 ZNF883P0CG24 379 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 OXTRP30559 389 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 SGSHP51688 502 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 SLC8A3P57103 927 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 DAOAP59103 153 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 TRIP6Q15654 476 aaKnown RBP13.69□□□□□ -0.22
MRPL55-228ENST00000476267 SGO2Q562F6 1265 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 ZNF658Q5TYW1 1059 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-228ENST00000476267 BSPRYQ5W0U4 402 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 ANKRD40Q6AI12 368 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 MSANTD2Q6P1R3 559 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 SERPINA13PQ6UXR4 307 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 DBX2Q6ZNG2 339 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 GLRX5Q86SX6 157 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 ADIPOR2Q86V24 386 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 ADAMTS14Q8WXS8 1223 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 ZSWIM1Q9BR11 485 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 CIPCQ9C0C6 399 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 PCED1AQ9H1Q7 454 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 IL21RQ9HBE5 538 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 GDPD2Q9HCC8 539 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 SLCO1B1Q9Y6L6 691 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 TMEM131Q92545 1883 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 CACNA1EQ15878 2313 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 PTPRBP23467 1997 aa13.69□□□□□ -0.22
MRPL55-228ENST00000476267 TRIM49BA6NDI0 452 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 TAF4O00268 1085 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 BCAT2O15382 392 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-228ENST00000476267 MSI1O43347 362 aaKnown RBP13.68□□□□□ -0.22
MRPL55-228ENST00000476267 SYNCRIPO60506 623 aaKnown RBP13.68□□□□□ -0.22
MRPL55-228ENST00000476267 FTH1P19P0C7X4 201 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 SETSIPP0DME0 302 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 VDRP11473 427 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 HLA-EP13747 358 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 ZNF445P59923 1031 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 E2F5Q15329 346 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 DCAF17Q5H9S7 520 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-228ENST00000476267 ADGRF1Q5T601 910 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 LCLAT1Q6UWP7 414 aa13.68□□□□□ -0.22
MRPL55-228ENST00000476267 ENGASEQ8NFI3 743 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms