RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 FMNL3Q8IVF7 1028 aa10.35□□□□□ -0.75
PTPN7-208ENST00000476061 SIX6OS1Q8N1H7 587 aa10.35□□□□□ -0.75
PTPN7-208ENST00000476061 ZNF557Q8N988 423 aaPredicted RBP10.35□□□□□ -0.75
PTPN7-208ENST00000476061 TRIML1Q8N9V2 468 aa10.35□□□□□ -0.75
PTPN7-208ENST00000476061 LMO3Q8TAP4 145 aa10.35□□□□□ -0.75
PTPN7-208ENST00000476061 WFIKKN2Q8TEU8 576 aa10.35□□□□□ -0.75
PTPN7-208ENST00000476061 DNASE2BQ8WZ79 361 aa10.35□□□□□ -0.75
PTPN7-208ENST00000476061 BHMTQ93088 406 aa10.35□□□□□ -0.75
PTPN7-208ENST00000476061 AZIN2Q96A70 460 aa10.35□□□□□ -0.75
PTPN7-208ENST00000476061 HSFY1Q96LI6 401 aa10.35□□□□□ -0.75
PTPN7-208ENST00000476061 HSPA12BQ96MM6 686 aa10.35□□□□□ -0.75
PTPN7-208ENST00000476061 PRDM16Q9HAZ2 1276 aa10.35□□□□□ -0.75
PTPN7-208ENST00000476061 DNAAF2Q9NVR5 837 aaKnown RBP10.35□□□□□ -0.75
PTPN7-208ENST00000476061 WSB2Q9NYS7 404 aaPredicted RBP10.35□□□□□ -0.75
PTPN7-208ENST00000476061 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.35□□□□□ -0.75
PTPN7-208ENST00000476061 WDR87Q6ZQQ6 2873 aa10.35□□□□□ -0.75
PTPN7-208ENST00000476061 ATXN2Q99700 1313 aaKnown RBP10.34□□□□□ -0.75
PTPN7-208ENST00000476061 NCOR2Q9Y618 2525 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 IRAK2O43187 625 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 SYNCRIPO60506 623 aaKnown RBP10.34□□□□□ -0.75
PTPN7-208ENST00000476061 GNA14O95837 355 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 IGLV3-27P01718 113 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 CFIP05156 583 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 NCAM1P13591 858 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 GNSP15586 552 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 HOXD9P28356 352 aaPredicted RBP10.34□□□□□ -0.75
PTPN7-208ENST00000476061 MAPK8P45983 427 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 COPAP53621 1224 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 RING1Q06587 406 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 LRMPQ12912 555 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 UAP1L1Q3KQV9 507 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 CCDC40Q4G0X9 1142 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 TMEM215Q68D42 235 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 SMYD5Q6GMV2 418 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 TTI2Q6NXR4 508 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 TMEM270Q6UE05 265 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 KIAA1324Q6UXG2 1013 aaKnown RBP10.34□□□□□ -0.75
PTPN7-208ENST00000476061 TMPRSS6Q8IU80 811 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 UNC45BQ8IWX7 931 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 HDDC3Q8N4P3 179 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTPN7-208ENST00000476061 UBA3Q8TBC4 463 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 TFAP2BQ92481 460 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 PRCCQ92733 491 aaPredicted RBP10.34□□□□□ -0.75
PTPN7-208ENST00000476061 ERCC4Q92889 916 aaPredicted RBP10.34□□□□□ -0.75
PTPN7-208ENST00000476061 TMA16Q96EY4 203 aaKnown RBP10.34□□□□□ -0.75
PTPN7-208ENST00000476061 ZDHHC5Q9C0B5 715 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 MKRN2Q9H000 416 aaKnown RBP10.34□□□□□ -0.75
PTPN7-208ENST00000476061 PCED1AQ9H1Q7 454 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 SFMBT1Q9UHJ3 866 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 MAN1B1Q9UKM7 699 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 CLEC4EQ9ULY5 219 aa10.34□□□□□ -0.75
PTPN7-208ENST00000476061 ASCC3Q8N3C0 2202 aaKnown RBP10.34□□□□□ -0.75
PTPN7-208ENST00000476061 NYNRINQ9P2P1 1898 aaKnown RBP10.34□□□□□ -0.75
PTPN7-208ENST00000476061 METTL12A8MUP2 240 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 PPP1R3GB7ZBB8 358 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 RNF225M0QZC1 329 aaPredicted RBP10.33□□□□□ -0.76
PTPN7-208ENST00000476061 OPHN1O60890 802 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 GABBR2O75899 941 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 KRT37O76014 449 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 FBXO21O94952 628 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 PROS1P07225 676 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 CD44P16070 742 aaKnown RBP10.33□□□□□ -0.76
PTPN7-208ENST00000476061 HLA-FP30511 346 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 RPL34P49207 117 aaKnown RBP10.33□□□□□ -0.76
PTPN7-208ENST00000476061 TPMTP51580 245 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 ARID5AQ03989 594 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 NNTQ13423 1086 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 CAMK2GQ13555 558 aaPredicted RBP10.33□□□□□ -0.76
PTPN7-208ENST00000476061 MORC3Q14149 939 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 MEA1Q16626 185 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 NUGGCQ68CJ6 796 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 PMF1Q6P1K2 205 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 SERPINA13PQ6UXR4 307 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 BEND5Q7L4P6 421 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 TRIM59Q8IWR1 403 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 RGL4Q8IZJ4 473 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 AHI1Q8N157 1196 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 PPM1KQ8N3J5 372 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 MINDY1Q8N5J2 469 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 DEFB119Q8N690 84 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 EHBP1Q8NDI1 1231 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 DEFB124Q8NES8 71 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 NDRG1Q92597 394 aaKnown RBP10.33□□□□□ -0.76
PTPN7-208ENST00000476061 EDEM1Q92611 657 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 GOLGA1Q92805 767 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 SIPA1Q96FS4 1042 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 TOE1Q96GM8 510 aaKnown RBP10.33□□□□□ -0.76
PTPN7-208ENST00000476061 NUP58Q9BVL2 599 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 CIPCQ9C0C6 399 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 SLC6A17Q9H1V8 727 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 TMEM245Q9H330 911 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 FBRSQ9HAH7 460 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 CD93Q9NPY3 652 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 CNTN6Q9UQ52 1028 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 PCDHB4Q9Y5E5 795 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 PCNX2A6NKB5 2137 aa10.33□□□□□ -0.76
PTPN7-208ENST00000476061 A0A1B0GTW7 788 aa10.32□□□□□ -0.76
PTPN7-208ENST00000476061 TMEM8BA6NDV4 472 aa10.32□□□□□ -0.76
PTPN7-208ENST00000476061 KCNJ18B7U540 433 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms