RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 APEX2Q9UBZ4 518 aa12.78□□□□□ -0.36
SSR1-205ENST00000475213 CLEC4EQ9ULY5 219 aa12.78□□□□□ -0.36
SSR1-205ENST00000475213 BCLAF3A2AJT9 711 aaKnown RBP12.77□□□□□ -0.37
SSR1-205ENST00000475213 GTPBP10A4D1E9 387 aaKnown RBP12.77□□□□□ -0.37
SSR1-205ENST00000475213 BECN2A8MW95 431 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 SLC30A4O14863 429 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 THAP12O43422 761 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 MED7O43513 233 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 LATS1O95835 1130 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 FYNP06241 537 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 GABRG2P18507 467 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 PON1P27169 355 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 GNA15P30679 374 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 MEA1Q16626 185 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 GEN1Q17RS7 908 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 MAP7D1Q3KQU3 841 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 KIAA1211LQ6NV74 962 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 SCUBE3Q8IX30 993 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 FRMD1Q8N878 549 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 C12orf50Q8NA57 414 aaPredicted RBP12.77□□□□□ -0.37
SSR1-205ENST00000475213 IPO4Q8TEX9 1081 aaKnown RBP12.77□□□□□ -0.37
SSR1-205ENST00000475213 PTCD2Q8WV60 388 aaKnown RBP12.77□□□□□ -0.37
SSR1-205ENST00000475213 GOLGA1Q92805 767 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 ERLEC1Q96DZ1 483 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 PIWIL1Q96J94 861 aaKnown RBP12.77□□□□□ -0.37
SSR1-205ENST00000475213 SPACA7Q96KW9 195 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 CD248Q9HCU0 757 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 VPS45Q9NRW7 570 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 RXFP3Q9NSD7 469 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 LMBRD1Q9NUN5 540 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 CACNA2D2Q9NY47 1150 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 CYTH4Q9UIA0 394 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 MBD1Q9UIS9 605 aaPredicted RBP12.77□□□□□ -0.37
SSR1-205ENST00000475213 STOML2Q9UJZ1 356 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 RAD54BQ9Y620 910 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 CKAP5Q14008 2032 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 NCOR2Q9Y618 2525 aa12.77□□□□□ -0.37
SSR1-205ENST00000475213 MED19A0JLT2 244 aaPredicted RBP12.76□□□□□ -0.37
SSR1-205ENST00000475213 DCDC2BA2VCK2 349 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 WASH3PC4AMC7 463 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 GFRA2O00451 464 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 TSPAN3O60637 253 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 CAVIN2O95810 425 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 IGLV3-27P01718 113 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 NCAM1P13591 858 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 HOXD9P28356 352 aaPredicted RBP12.76□□□□□ -0.37
SSR1-205ENST00000475213 ERCC5P28715 1186 aaPredicted RBP12.76□□□□□ -0.37
SSR1-205ENST00000475213 USP8P40818 1118 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 ACADSBP45954 432 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 BYSLQ13895 437 aaKnown RBP12.76□□□□□ -0.37
SSR1-205ENST00000475213 MAN2A1Q16706 1144 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 MPPE1Q53F39 396 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 ADGRF1Q5T601 910 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 TCEAL6Q6IPX3 200 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 ANKS1BQ7Z6G8 1248 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 FAM114A1Q8IWE2 563 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 STK32AQ8WU08 396 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 SHC3Q92529 594 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 TCEAL3Q969E4 200 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 SLC4A5Q9BY07 1137 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 SLC2A11Q9BYW1 496 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 SIX2Q9NPC8 291 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 CALCOCO1Q9P1Z2 691 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 THAP10Q9P2Z0 257 aaPredicted RBP12.76□□□□□ -0.37
SSR1-205ENST00000475213 DACH1Q9UI36 760 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 LHX6Q9UPM6 363 aa12.76□□□□□ -0.37
SSR1-205ENST00000475213 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 E5RJQ4 531 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 PAPSS1O43252 624 aaPredicted RBP12.75□□□□□ -0.37
SSR1-205ENST00000475213 SART1O43290 800 aaKnown RBP12.75□□□□□ -0.37
SSR1-205ENST00000475213 NDUFV2P19404 249 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 DHPSP49366 369 aaPredicted RBP12.75□□□□□ -0.37
SSR1-205ENST00000475213 SGSHP51688 502 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 TBX4P57082 545 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 ZNF445P59923 1031 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 RING1Q06587 406 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 HSP90AA4PQ58FG1 418 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 MIIPQ5JXC2 388 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 NUGGCQ68CJ6 796 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 TMEM215Q68D42 235 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 LPCAT2Q7L5N7 544 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 CYP2U1Q7Z449 544 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 TMEM110Q86TL2 294 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 UNC45BQ8IWX7 931 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 TMEFF1Q8IYR6 380 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 DQX1Q8TE96 717 aaKnown RBP12.75□□□□□ -0.37
SSR1-205ENST00000475213 UCMAQ8WVF2 138 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 FAM149B1Q96BN6 582 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 TMA16Q96EY4 203 aaKnown RBP12.75□□□□□ -0.37
SSR1-205ENST00000475213 NDST4Q9H3R1 872 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 ELOVL2Q9NXB9 296 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 AJAP1Q9UKB5 411 aaPredicted RBP12.75□□□□□ -0.37
SSR1-205ENST00000475213 NAALADL1Q9UQQ1 740 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 STON1Q9Y6Q2 735 aa12.75□□□□□ -0.37
SSR1-205ENST00000475213 GOLGA6L7A0A1B0GV03 622 aa12.74□□□□□ -0.37
SSR1-205ENST00000475213 NPC1O15118 1278 aa12.74□□□□□ -0.37
SSR1-205ENST00000475213 ZBTB24O43167 697 aaPredicted RBP12.74□□□□□ -0.37
SSR1-205ENST00000475213 ACSL4O60488 711 aa12.74□□□□□ -0.37
SSR1-205ENST00000475213 PRKCSHP14314 528 aaPredicted RBP12.74□□□□□ -0.37
SSR1-205ENST00000475213 HLA-FP30511 346 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms