RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 FBXO10Q9UK96 956 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 CAPN11Q9UMQ6 739 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 ITIH6Q6UXX5 1313 aa16.87■□□□□ 0.29
SRM-204ENST00000475189 SYNJ2BP-COX16A0A087WUM0 186 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 GOLGA6L7A0A1B0GV03 622 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 ANTXRLA6NF34 631 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 TSPAN3O60637 253 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 CISD3P0C7P0 127 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 GBP1P32455 592 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 GRIA2P42262 883 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 SLC11A2P49281 568 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 ZBED6P86452 979 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 OTUD1Q5VV17 481 aaPredicted RBP16.86■□□□□ 0.29
SRM-204ENST00000475189 NADSYN1Q6IA69 706 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 ZNF571Q7Z3V5 609 aaPredicted RBP16.86■□□□□ 0.29
SRM-204ENST00000475189 PHLDB2Q86SQ0 1253 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 NT5C3BQ969T7 300 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 NPY6RQ99463 290 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 FAM204AQ9H8W3 233 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 PRMT8Q9NR22 394 aaPredicted RBP16.86■□□□□ 0.29
SRM-204ENST00000475189 C2orf42Q9NWW7 574 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 DDIT4Q9NX09 232 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 RRN3Q9NYV6 651 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 ADAM22Q9P0K1 906 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 COX16Q9P0S2 106 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 CALCOCO1Q9P1Z2 691 aa16.86■□□□□ 0.29
SRM-204ENST00000475189 CHURC1-FNTBB4DL54 471 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 MOCS2O96007 188 aaPredicted RBP16.85■□□□□ 0.29
SRM-204ENST00000475189 APOEP02649 317 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 CYBBP04839 570 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 GYPCP04921 128 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 CALB1P05937 261 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 SKILP12757 684 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 TFE3P19532 575 aaPredicted RBP16.85■□□□□ 0.29
SRM-204ENST00000475189 SLC6A4P31645 630 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 FLT3P36888 993 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 TNFRSF4P43489 277 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 CXCL12P48061 93 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 CCR3P51677 355 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 GSCP56915 257 aaPredicted RBP16.85■□□□□ 0.29
SRM-204ENST00000475189 SATB1Q01826 763 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 CSTF1Q05048 431 aaKnown RBP16.85■□□□□ 0.29
SRM-204ENST00000475189 KLHL30Q0D2K2 578 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 PREPLQ4J6C6 727 aaPredicted RBP16.85■□□□□ 0.29
SRM-204ENST00000475189 MPPE1Q53F39 396 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 GRAMD4Q6IC98 578 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 ACAD10Q6JQN1 1059 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 TRNP1Q6NT89 227 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 RFWD3Q6PCD5 774 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 MON1BQ7L1V2 547 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 ARCQ7LC44 396 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 TERB1Q8NA31 727 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 DDI1Q8WTU0 396 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 SYN2Q92777 582 aaPredicted RBP16.85■□□□□ 0.29
SRM-204ENST00000475189 IRF2BPLQ9H1B7 796 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 NUCKS1Q9H1E3 243 aaKnown RBP16.85■□□□□ 0.29
SRM-204ENST00000475189 METTL5Q9NRN9 209 aaKnown RBP16.85■□□□□ 0.29
SRM-204ENST00000475189 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.85■□□□□ 0.29
SRM-204ENST00000475189 TAS2R14Q9NYV8 317 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 XPO7Q9UIA9 1087 aaKnown RBP16.85■□□□□ 0.29
SRM-204ENST00000475189 FBXO4Q9UKT5 387 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 LUC7L2Q9Y383 392 aaKnown RBP16.85■□□□□ 0.29
SRM-204ENST00000475189 PIEZO1Q92508 2521 aa16.85■□□□□ 0.29
SRM-204ENST00000475189 TBC1D3BA6NDS4 549 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 KCNU1A8MYU2 1149 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 M0QYT0 321 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 SP9P0CG40 484 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 CHRM1P11229 460 aaPredicted RBP16.84■□□□□ 0.29
SRM-204ENST00000475189 CASP14P31944 242 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 DGKGP49619 791 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 SGSHP51688 502 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 SEC13P55735 322 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 C1QBPQ07021 282 aaKnown RBP16.84■□□□□ 0.29
SRM-204ENST00000475189 NME3Q13232 169 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 SLC25A52Q3SY17 297 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 PIK3R6Q5UE93 754 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 HGSNATQ68CP4 663 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 ATP6V0D2Q8N8Y2 350 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 RPLP0P6Q8NHW5 317 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 USP33Q8TEY7 942 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 TMA16Q96EY4 203 aaKnown RBP16.84■□□□□ 0.29
SRM-204ENST00000475189 PGAP3Q96FM1 320 aaPredicted RBP16.84■□□□□ 0.29
SRM-204ENST00000475189 BTN2A3PQ96KV6 586 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 TBCBQ99426 244 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 IRX2Q9BZI1 471 aaPredicted RBP16.84■□□□□ 0.29
SRM-204ENST00000475189 PIGVQ9NUD9 493 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 CLEC4EQ9ULY5 219 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 STAP1Q9ULZ2 295 aa16.84■□□□□ 0.29
SRM-204ENST00000475189 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.84■□□□□ 0.29
SRM-204ENST00000475189 DDX3XO00571 662 aaKnown RBP eCLIP16.83■□□□□ 0.28
SRM-204ENST00000475189 AP5Z1O43299 807 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 ATG13O75143 517 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 PAPSS2O95340 614 aaPredicted RBP16.83■□□□□ 0.28
SRM-204ENST00000475189 GJB6O95452 261 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 SLC2A3P11169 496 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 TDGF1P13385 188 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 HOXD9P28356 352 aaPredicted RBP16.83■□□□□ 0.28
SRM-204ENST00000475189 CCR1P32246 355 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 KIR2DL1P43626 348 aaPredicted RBP16.83■□□□□ 0.28
SRM-204ENST00000475189 SULT1E1P49888 294 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms