RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 GOLGA8SH3BPF8 625 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 SCAMP3O14828 347 aaKnown RBP17.6■□□□□ 0.41
SCAF11-206ENST00000474828 ACSL4O60488 711 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 HMBSP08397 361 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 CHRM1P11229 460 aaPredicted RBP17.6■□□□□ 0.41
SCAF11-206ENST00000474828 CHRNB1P11230 501 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 ADH5P11766 374 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 TFE3P19532 575 aaPredicted RBP17.6■□□□□ 0.41
SCAF11-206ENST00000474828 CCR1P32246 355 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 EIF4A3P38919 411 aaKnown RBP17.6■□□□□ 0.41
SCAF11-206ENST00000474828 MAGEA9P43362 315 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 MAMLD1Q13495 774 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 SLC18A3Q16572 532 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 CCDC14Q49A88 953 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 MPP7Q5T2T1 576 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 ARTNQ5T4W7 220 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 NADSYN1Q6IA69 706 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 STRADAQ7RTN6 431 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 SUGP1Q8IWZ8 645 aaKnown RBP17.6■□□□□ 0.41
SCAF11-206ENST00000474828 JOSD2Q8TAC2 188 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 ADAM32Q8TC27 787 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 TRIM11Q96F44 468 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 BTN2A3PQ96KV6 586 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 PRMT1Q99873 361 aaKnown RBP17.6■□□□□ 0.41
SCAF11-206ENST00000474828 PIGVQ9NUD9 493 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 SEPT11Q9NVA2 429 aaKnown RBP17.6■□□□□ 0.41
SCAF11-206ENST00000474828 DDIT4Q9NX09 232 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 ARHGEF38Q9NXL2 777 aa17.6■□□□□ 0.41
SCAF11-206ENST00000474828 MTF2Q9Y483 593 aaPredicted RBP17.6■□□□□ 0.41
SCAF11-206ENST00000474828 I6L893 689 aaPredicted RBP17.59■□□□□ 0.41
SCAF11-206ENST00000474828 M0QYT0 321 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 PI15O43692 258 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 SLC11A2P49281 568 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 C5orf22Q49AR2 442 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 ZC3H12AQ5D1E8 599 aaKnown RBP17.59■□□□□ 0.41
SCAF11-206ENST00000474828 BRMS1LQ5PSV4 323 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 ACBD5Q5T8D3 534 aaPredicted RBP17.59■□□□□ 0.41
SCAF11-206ENST00000474828 ALKBH5Q6P6C2 394 aaKnown RBP17.59■□□□□ 0.41
SCAF11-206ENST00000474828 SYNPOQ8N3V7 929 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 FNIP1Q8TF40 1166 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 RXFP2Q8WXD0 754 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 EZH1Q92800 747 aaPredicted RBP17.59■□□□□ 0.41
SCAF11-206ENST00000474828 PANX2Q96RD6 677 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 TBCBQ99426 244 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 CHP1Q99653 195 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 IER2Q9BTL4 223 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 FOXQ1Q9C009 403 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 FBRSL1Q9HCM7 1045 aaKnown RBP17.59■□□□□ 0.41
SCAF11-206ENST00000474828 PARVAQ9NVD7 372 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 ZNHIT6Q9NWK9 470 aaKnown RBP17.59■□□□□ 0.41
SCAF11-206ENST00000474828 SIT1Q9Y3P8 196 aa17.59■□□□□ 0.41
SCAF11-206ENST00000474828 KIAA1549LQ6ZVL6 1849 aa17.58■□□□□ 0.41
SCAF11-206ENST00000474828 TMEM191CA6NGB0 347 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 PDGFRAP16234 1089 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 DRD1P21728 446 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 CD72P21854 359 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 GALK1P51570 392 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 ZNF143P52747 638 aaPredicted RBP17.58■□□□□ 0.4
SCAF11-206ENST00000474828 RNASE9P60153 205 aaKnown RBP17.58■□□□□ 0.4
SCAF11-206ENST00000474828 RPL7AP62424 266 aaKnown RBP17.58■□□□□ 0.4
SCAF11-206ENST00000474828 DGKKQ5KSL6 1271 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 PIK3R6Q5UE93 754 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 FSTL4Q6MZW2 842 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 DNAJC24Q6P3W2 148 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.58■□□□□ 0.4
SCAF11-206ENST00000474828 C12orf40Q86WS4 652 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 EMC1Q8N766 993 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 TMEM105Q8N8V8 129 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 TTC16Q8NEE8 873 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 TTC8Q8TAM2 541 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 CD101Q93033 1021 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 EXOC4Q96A65 974 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 CFAP57Q96MR6 1250 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 P2RY13Q9BPV8 354 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 SLC2A11Q9BYW1 496 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 MFSD1Q9H3U5 465 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 FAM204AQ9H8W3 233 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 IMPACTQ9P2X3 320 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 SLC27A6Q9Y2P4 619 aa17.58■□□□□ 0.4
SCAF11-206ENST00000474828 KMT2EQ8IZD2 1858 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 FAM170BA6NMN3 283 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 TULP3O75386 442 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 LCA5LO95447 670 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 ADCY5O95622 1261 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 APOEP02649 317 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 CYP1A2P05177 515 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 CISD3P0C7P0 127 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 TYRP14679 529 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 AVPR2P30518 371 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 SDC4P31431 198 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 SLC6A4P31645 630 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 RDXP35241 583 aaKnown RBP17.57■□□□□ 0.4
SCAF11-206ENST00000474828 SULT1E1P49888 294 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 TSR1Q2NL82 804 aaKnown RBP17.57■□□□□ 0.4
SCAF11-206ENST00000474828 MPPE1Q53F39 396 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 NAIF1Q69YI7 327 aaPredicted RBP17.57■□□□□ 0.4
SCAF11-206ENST00000474828 ATP6V0D2Q8N8Y2 350 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 C1orf74Q96LT6 269 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 DDX50Q9BQ39 737 aaKnown RBP17.57■□□□□ 0.4
SCAF11-206ENST00000474828 SELENOOQ9BVL4 669 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms