RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 CDK5RAP1Q96SZ6 601 aaKnown RBP21.12■□□□□ 0.97
CDHR3-210ENST00000474330 TKTL2Q9H0I9 626 aa21.12■□□□□ 0.97
CDHR3-210ENST00000474330 ANLNQ9NQW6 1124 aa21.12■□□□□ 0.97
CDHR3-210ENST00000474330 ARHGEF38Q9NXL2 777 aa21.12■□□□□ 0.97
CDHR3-210ENST00000474330 RCOR3Q9P2K3 495 aaPredicted RBP21.12■□□□□ 0.97
CDHR3-210ENST00000474330 ZNF840PA6NDX5 716 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 I6L893 689 aaPredicted RBP21.11■□□□□ 0.97
CDHR3-210ENST00000474330 C8AP07357 584 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 RHOXF2BP0C7M4 288 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 CCR1P32246 355 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 PPP2R5DQ14738 602 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 PPP6R3Q5H9R7 873 aaPredicted RBP21.11■□□□□ 0.97
CDHR3-210ENST00000474330 TADA2BQ86TJ2 420 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 PABPC5Q96DU9 382 aaKnown RBP21.11■□□□□ 0.97
CDHR3-210ENST00000474330 RHOXF2Q9BQY4 288 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 MAK16Q9BXY0 300 aaKnown RBP21.11■□□□□ 0.97
CDHR3-210ENST00000474330 MAGEB5Q9BZ81 275 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 ANKZF1Q9H8Y5 726 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 TMPRSS4Q9NRS4 437 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.11■□□□□ 0.97
CDHR3-210ENST00000474330 TRPM5Q9NZQ8 1165 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 TLR6Q9Y2C9 796 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 ANAPC1Q9H1A4 1944 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 TTC28Q96AY4 2481 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 TLR5O60602 858 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 CST8O60676 142 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 LRG1P02750 347 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 TFDP2Q14188 446 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 CCNG2Q16589 344 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 ANKRD20A8PQ5CZ79 823 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 RFX6Q8HWS3 928 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 PYROXD2Q8N2H3 581 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 CCDC26Q8TAB7 109 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 RNF34Q969K3 372 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 SLC39A13Q96H72 371 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 DCLK3Q9C098 648 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 EPC1Q9H2F5 836 aa21.11■□□□□ 0.97
CDHR3-210ENST00000474330 MSI1O43347 362 aaKnown RBP21.1■□□□□ 0.97
CDHR3-210ENST00000474330 CLASP2O75122 1294 aaKnown RBP21.1■□□□□ 0.97
CDHR3-210ENST00000474330 TBX18O95935 607 aa21.1■□□□□ 0.97
CDHR3-210ENST00000474330 FNTAP49354 379 aa21.1■□□□□ 0.97
CDHR3-210ENST00000474330 TUBP50607 506 aa21.1■□□□□ 0.97
CDHR3-210ENST00000474330 EFEMP1Q12805 493 aa21.1■□□□□ 0.97
CDHR3-210ENST00000474330 C10orf120Q5SQS8 335 aa21.1■□□□□ 0.97
CDHR3-210ENST00000474330 C1orf54Q8WWF1 131 aa21.1■□□□□ 0.97
CDHR3-210ENST00000474330 RUNDC3BQ96NL0 473 aa21.1■□□□□ 0.97
CDHR3-210ENST00000474330 PLEKHA4Q9H4M7 779 aa21.1■□□□□ 0.97
CDHR3-210ENST00000474330 CCSER2Q9H7U1 834 aa21.1■□□□□ 0.97
CDHR3-210ENST00000474330 CWC15Q9P013 229 aaKnown RBP21.1■□□□□ 0.97
CDHR3-210ENST00000474330 MARCH2Q9P0N8 246 aa21.1■□□□□ 0.97
CDHR3-210ENST00000474330 PCYOX1Q9UHG3 505 aa21.1■□□□□ 0.97
CDHR3-210ENST00000474330 R3HDM2Q9Y2K5 976 aaKnown RBP21.1■□□□□ 0.97
CDHR3-210ENST00000474330 TARSL2A2RTX5 802 aaKnown RBP21.09■□□□□ 0.97
CDHR3-210ENST00000474330 LINC01565O15544 149 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 SLC2A3P11169 496 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 KCNA5P22460 613 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 COILP38432 576 aaPredicted RBP21.09■□□□□ 0.97
CDHR3-210ENST00000474330 ARL4AP40617 200 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 DLX2Q07687 328 aaPredicted RBP21.09■□□□□ 0.97
CDHR3-210ENST00000474330 TRIP4Q15650 581 aaPredicted RBP21.09■□□□□ 0.97
CDHR3-210ENST00000474330 AAK1Q2M2I8 961 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 HECTD3Q5T447 861 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 KLHDC10Q6PID8 442 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 CCDC137Q6PK04 289 aaKnown RBP21.09■□□□□ 0.97
CDHR3-210ENST00000474330 MAATS1Q7Z4T9 603 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 TTC13Q8NBP0 860 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 PCDH19Q8TAB3 1148 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 CSPG4P5Q96PW8 444 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 HAPLN3Q96S86 360 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 OSBPL2Q9H1P3 480 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 IGFLR1Q9H665 355 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 AMACRQ9UHK6 382 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 BDP1A6H8Y1 2624 aa21.09■□□□□ 0.97
CDHR3-210ENST00000474330 KCNU1A8MYU2 1149 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 H3BRJ5 948 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 PER2O15055 1255 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 RAD51CO43502 376 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 F11P03951 625 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 ATP5C1P36542 298 aaKnown RBP21.08■□□□□ 0.97
CDHR3-210ENST00000474330 ZNF135P52742 658 aaPredicted RBP21.08■□□□□ 0.97
CDHR3-210ENST00000474330 TBX4P57082 545 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 SEMA3BQ13214 749 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 ADAM15Q13444 863 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 PABPC1LQ4VXU2 614 aaKnown RBP21.08■□□□□ 0.97
CDHR3-210ENST00000474330 SLC9A4Q6AI14 798 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 TTC27Q6P3X3 843 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 RBM23Q86U06 439 aaKnown RBP21.08■□□□□ 0.97
CDHR3-210ENST00000474330 PQLC3Q8N755 202 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.08■□□□□ 0.97
CDHR3-210ENST00000474330 SLC22A17Q8WUG5 538 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 ATG4AQ8WYN0 398 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 PPP2R3CQ969Q6 453 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 FRMD8P1Q9BZ68 369 aaPredicted RBP21.08■□□□□ 0.97
CDHR3-210ENST00000474330 TLE6Q9H808 572 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 PRDM16Q9HAZ2 1276 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 IL21Q9HBE4 155 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 ZNF334Q9HCZ1 680 aaPredicted RBP21.08■□□□□ 0.97
CDHR3-210ENST00000474330 CLDND1Q9NY35 253 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 RASAL2Q9UJF2 1139 aa21.08■□□□□ 0.97
CDHR3-210ENST00000474330 DNMT3LQ9UJW3 386 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms