RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 NNTQ13423 1086 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 BYSLQ13895 437 aaKnown RBP11.64□□□□□ -0.55
CKS1B-206ENST00000474215 RAPGEF1Q13905 1077 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 DRAP1Q14919 205 aaPredicted RBP11.64□□□□□ -0.55
CKS1B-206ENST00000474215 E2F5Q15329 346 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 GEN1Q17RS7 908 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 PASD1Q8IV76 773 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 PGBD3Q8N328 593 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 HMGB4Q8WW32 186 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 RMDN1Q96DB5 314 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 SERPINB11Q96P15 392 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 NOX5Q96PH1 765 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 CPXM1Q96SM3 734 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 GABRG3Q99928 467 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 NAA15Q9BXJ9 866 aaKnown RBP11.64□□□□□ -0.55
CKS1B-206ENST00000474215 VPS16Q9H269 839 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 ARRDC1-AS1Q9H2J1 176 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 POPDC2Q9HBU9 364 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 ELOVL2Q9NXB9 296 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 PCDHGA5Q9Y5G8 931 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 KIAA1549LQ6ZVL6 1849 aa11.64□□□□□ -0.55
CKS1B-206ENST00000474215 SPTBN4Q9H254 2564 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 GOLGA6L7A0A1B0GV03 622 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 WASH3PC4AMC7 463 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 NPC1O15118 1278 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 IRAK2O43187 625 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 MAP3K13O43283 966 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 TPM2P07951 284 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 GLI1P08151 1106 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 SDHBP21912 280 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 HOXD9P28356 352 aaPredicted RBP11.63□□□□□ -0.55
CKS1B-206ENST00000474215 P2RY2P41231 377 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 EIF4HQ15056 248 aaKnown RBP11.63□□□□□ -0.55
CKS1B-206ENST00000474215 KRT31Q15323 416 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 TAF5Q15542 800 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 STX1AQ16623 288 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 RSPO4Q2I0M5 234 aaPredicted RBP11.63□□□□□ -0.55
CKS1B-206ENST00000474215 EFHC1Q5JVL4 640 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 MPP7Q5T2T1 576 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 CCDC183Q5T5S1 534 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 PIK3R6Q5UE93 754 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 KIAA1211LQ6NV74 962 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 RFWD3Q6PCD5 774 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 C11orf57Q6ZUT1 292 aaPredicted RBP11.63□□□□□ -0.55
CKS1B-206ENST00000474215 ANKS1BQ7Z6G8 1248 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 ADAM32Q8TC27 787 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 IPO4Q8TEX9 1081 aaKnown RBP11.63□□□□□ -0.55
CKS1B-206ENST00000474215 UCMAQ8WVF2 138 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 RLN3Q8WXF3 142 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 SLC39A13Q96H72 371 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 FCRL2Q96LA5 508 aaPredicted RBP11.63□□□□□ -0.55
CKS1B-206ENST00000474215 DDX50Q9BQ39 737 aaKnown RBP11.63□□□□□ -0.55
CKS1B-206ENST00000474215 LSM14BQ9BX40 385 aaKnown RBP11.63□□□□□ -0.55
CKS1B-206ENST00000474215 STK33Q9BYT3 514 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 CD248Q9HCU0 757 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 PLCB1Q9NQ66 1216 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 CACNA2D2Q9NY47 1150 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 DLL3Q9NYJ7 618 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 THAP10Q9P2Z0 257 aaPredicted RBP11.63□□□□□ -0.55
CKS1B-206ENST00000474215 TJP2Q9UDY2 1190 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 FHOD1Q9Y613 1164 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 STON1Q9Y6Q2 735 aa11.63□□□□□ -0.55
CKS1B-206ENST00000474215 TRUB2O95900 331 aaKnown RBP11.62□□□□□ -0.55
CKS1B-206ENST00000474215 ZNF806P0C7X5 589 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 CYP11B1P15538 503 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 GABRG2P18507 467 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 BCKDHBP21953 392 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 SLC6A4P31645 630 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 MYL5Q02045 173 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 ENPP2Q13822 863 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 PUM1Q14671 1186 aaKnown RBP eCLIP11.62□□□□□ -0.55
CKS1B-206ENST00000474215 MAP7D1Q3KQU3 841 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 DCAF6Q58WW2 860 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 FAM133BQ5BKY9 247 aaKnown RBP11.62□□□□□ -0.55
CKS1B-206ENST00000474215 PLA2G2CQ5R387 149 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 FKBP15Q5T1M5 1219 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 TMEM215Q68D42 235 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 NADSYN1Q6IA69 706 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 PRR23CQ6ZRP0 262 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 TAC4Q86UU9 113 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 TMEM35BQ8NCS4 154 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 C1orf131Q8NDD1 294 aaKnown RBP11.62□□□□□ -0.55
CKS1B-206ENST00000474215 SPACA7Q96KW9 195 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 CIPCQ9C0C6 399 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 PDCL3Q9H2J4 239 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 ASNSD1Q9NWL6 643 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 CEP83Q9Y592 693 aa11.62□□□□□ -0.55
CKS1B-206ENST00000474215 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.62□□□□□ -0.55
CKS1B-206ENST00000474215 BCLAF3A2AJT9 711 aaKnown RBP11.61□□□□□ -0.55
CKS1B-206ENST00000474215 LRRC10BA6NIK2 292 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 F8VZ95 297 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 TBL1XO60907 577 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 HSF2BPO75031 334 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 IGLV3-25P01717 112 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 APOEP02649 317 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 ERBB2P04626 1255 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 SLC2A3P11169 496 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 HLA-FP30511 346 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 MPLP40238 635 aa11.61□□□□□ -0.55
CKS1B-206ENST00000474215 SGSHP51688 502 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms