RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SYAP1Q96A49 352 aaPredicted RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 ELMO3Q96BJ8 720 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 CCDC127Q96BQ5 260 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 TNIP3Q96KP6 325 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 MED10Q9BTT4 135 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 NUP58Q9BVL2 599 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 PCED1AQ9H1Q7 454 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 FBXO44Q9H4M3 255 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 PRORYQ9H606 182 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 C6orf106Q9H6K1 298 aaPredicted RBP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 NMUR1Q9HB89 426 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 AGPAT3Q9NRZ7 376 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 HMGXB4Q9UGU5 601 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 DNMT3LQ9UJW3 386 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 SCML2Q9UQR0 700 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 ANKRD6Q9Y2G4 727 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 SNX11Q9Y5W9 270 aa5.4□□□□□ -1.54
SNRNP40-204ENST00000474025 TEX15Q9BXT5 2789 aa5.4□□□□□ -1.55
SNRNP40-204ENST00000474025 COL6A6A6NMZ7 2263 aa5.4□□□□□ -1.55
SNRNP40-204ENST00000474025 A0A1W2PQH9 124 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 HHLA1C9JL84 531 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 H0Y8X5 98 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 PLK4O00444 970 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 CLIC2O15247 247 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 ARHGAP6O43182 974 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 PAPSS1O43252 624 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 TLX3O43711 291 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 SYNCRIPO60506 623 aaKnown RBP5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 VNN1O95497 513 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 FAM200BP0CF97 657 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 ACADMP11310 421 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 RARGP13631 454 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 HLA-EP13747 358 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 ACSL1P33121 698 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 CTSKP43235 329 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 PLA2G4AP47712 749 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 GRIA4P48058 902 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 CASP4P49662 377 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 CCT8P50990 548 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 CYP2J2P51589 502 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 ORC1Q13415 861 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 CAMK2GQ13555 558 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 NCOA4Q13772 614 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 SUZ12Q15022 739 aaKnown RBP5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 EIF4HQ15056 248 aaKnown RBP5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 CCDC157Q569K6 752 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 ZNF667Q5HYK9 610 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 KCNT1Q5JUK3 1230 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 C10orf120Q5SQS8 335 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 TMEM215Q68D42 235 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 LRRC69Q6ZNQ3 347 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 CLEC20AQ6ZU45 233 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 ANKS1BQ7Z6G8 1248 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 FAM124AQ86V42 546 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 TMPRSS12Q86WS5 348 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 C12orf29Q8N999 325 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 XXYLT1Q8NBI6 393 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 ENGASEQ8NFI3 743 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 OR2T3Q8NH03 318 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 ZNF507Q8TCN5 953 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 PLEKHO2Q8TD55 490 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 SORCS1Q8WY21 1168 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 SNX19Q92543 992 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 NXPE2Q96DL1 559 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 PIWIL1Q96J94 861 aaKnown RBP5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 ARID3AQ99856 593 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 ORAI3Q9BRQ5 295 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 PANK2Q9BZ23 570 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 FAM117AQ9C073 453 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 TNMDQ9H2S6 317 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 CLMPQ9H6B4 373 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 TM9SF3Q9HD45 589 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 OSGEPQ9NPF4 335 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 FAM49BQ9NUQ9 324 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 ELOVL2Q9NXB9 296 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 NUDT5Q9UKK9 219 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 CLEC4EQ9ULY5 219 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 SMC3Q9UQE7 1217 aa5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 MORC2Q9Y6X9 1032 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 MUC22E2RYF6 1773 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-204ENST00000474025 SHROOM3Q8TF72 1996 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 NBPF19A0A087WUL8 3843 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 TEX51A0A1B0GUA7 166 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 VPS37CA5D8V6 355 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 LRRIQ3A6PVS8 624 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 KCNK3O14649 394 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 RRP8O43159 456 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 TSPAN3O60637 253 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 PHACTR2O75167 634 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 SEMA4FO95754 770 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 C4BPAP04003 597 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 EPHX1P07099 455 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 CD27P26842 260 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 ADORA2BP29275 332 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 CORO1AP31146 461 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 CHKAP35790 457 aa5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 EIF2S3P41091 472 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-204ENST00000474025 ASPAP45381 313 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms