RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 FZD5Q13467 585 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 ZC3H12AQ5D1E8 599 aaKnown RBP14.29□□□□□ -0.12
USF1-205ENST00000473969 ACAD10Q6JQN1 1059 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 PHLDB2Q86SQ0 1253 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 ZNF687Q8N1G0 1237 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 SPEM1Q8N4L4 309 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 BTN2A3PQ96KV6 586 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 FCRL2Q96LA5 508 aaPredicted RBP14.29□□□□□ -0.12
USF1-205ENST00000473969 IRX2Q9BZI1 471 aaPredicted RBP14.29□□□□□ -0.12
USF1-205ENST00000473969 FBRSL1Q9HCM7 1045 aaKnown RBP14.29□□□□□ -0.12
USF1-205ENST00000473969 METTL5Q9NRN9 209 aaKnown RBP14.29□□□□□ -0.12
USF1-205ENST00000473969 PLK2Q9NYY3 685 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 TMCO5BA8MYB1 307 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 CACNG3O60359 315 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 RNF40O75150 1001 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 GYPCP04921 128 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 SERPING1P05155 500 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 KRT3P12035 628 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 PLA2G5P39877 138 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 CXCL12P48061 93 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 DGKGP49619 791 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 DEUP1Q05D60 604 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 MTAPQ13126 283 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 ANGPT1Q15389 498 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 SLC25A52Q3SY17 297 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 NAIF1Q69YI7 327 aaPredicted RBP14.28□□□□□ -0.12
USF1-205ENST00000473969 DNAJC24Q6P3W2 148 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 ARCQ7LC44 396 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 ZNF571Q7Z3V5 609 aaPredicted RBP14.28□□□□□ -0.12
USF1-205ENST00000473969 FAM217AQ8IXS0 508 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 ZNF557Q8N988 423 aaPredicted RBP14.28□□□□□ -0.12
USF1-205ENST00000473969 SLC39A13Q96H72 371 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 VCPIP1Q96JH7 1222 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 WDCPQ9H6R7 721 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 ZDBF2Q9HCK1 2354 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 STOML2Q9UJZ1 356 aa14.28□□□□□ -0.12
USF1-205ENST00000473969 KIF26AQ9ULI4 1882 aaPredicted RBP14.28□□□□□ -0.12
USF1-205ENST00000473969 F5P12259 2224 aa14.27□□□□□ -0.12
USF1-205ENST00000473969 COL4A2P08572 1712 aa14.27□□□□□ -0.12
USF1-205ENST00000473969 COL4A3Q01955 1670 aa14.27□□□□□ -0.12
USF1-205ENST00000473969 PENKP01210 267 aaPredicted RBP14.27□□□□□ -0.13
USF1-205ENST00000473969 IGLV3-25P01717 112 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 GZMAP12544 262 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 PDGFRAP16234 1089 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 SDC4P31431 198 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 TNFRSF4P43489 277 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 SEC13P55735 322 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 PITX1P78337 314 aaPredicted RBP14.27□□□□□ -0.13
USF1-205ENST00000473969 CSTF1Q05048 431 aaKnown RBP14.27□□□□□ -0.13
USF1-205ENST00000473969 E2F5Q15329 346 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 GAB4Q2WGN9 574 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 BRMS1LQ5PSV4 323 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 DCUN1D2Q6PH85 259 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 SARM1Q6SZW1 724 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 Q6ZS52 159 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 MON1BQ7L1V2 547 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 C12orf40Q86WS4 652 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 CHSY1Q86X52 802 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 VSTM4Q8IW00 320 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 ETFBKMTQ8IXQ9 262 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 MCOLN2Q8IZK6 566 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 ACDQ96AP0 544 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 TRIM11Q96F44 468 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 SLC2A11Q9BYW1 496 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 RBSNQ9H1K0 784 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 SLC8A2Q9UPR5 921 aa14.27□□□□□ -0.13
USF1-205ENST00000473969 ARIH1Q9Y4X5 557 aaPredicted RBP14.27□□□□□ -0.13
USF1-205ENST00000473969 GOLGA6L7A0A1B0GV03 622 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 KCNU1A8MYU2 1149 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 F5H5T6 163 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 H0Y858 1186 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 TBL1XO60907 577 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 RTN2O75298 545 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 RDXP35241 583 aaKnown RBP14.26□□□□□ -0.13
USF1-205ENST00000473969 FLT3P36888 993 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 GSCP56915 257 aaPredicted RBP14.26□□□□□ -0.13
USF1-205ENST00000473969 MRPS21P82921 87 aaKnown RBP14.26□□□□□ -0.13
USF1-205ENST00000473969 C10orf76Q5T2E6 689 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 MPP7Q5T2T1 576 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 FYB2Q5VWT5 728 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 SDE2Q6IQ49 451 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 RFWD3Q6PCD5 774 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 MAMSTRQ6ZN01 415 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 TRMT11Q7Z4G4 463 aaKnown RBP14.26□□□□□ -0.13
USF1-205ENST00000473969 DRC7Q8IY82 874 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 TERB1Q8NA31 727 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 HJURPQ8NCD3 748 aaPredicted RBP14.26□□□□□ -0.13
USF1-205ENST00000473969 C3orf20Q8ND61 904 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 PRSS33Q8NF86 280 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 OR8K1Q8NGG5 319 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 RPLP0P6Q8NHW5 317 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 UCMAQ8WVF2 138 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 RXFP2Q8WXD0 754 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 ATOH1Q92858 354 aaPredicted RBP14.26□□□□□ -0.13
USF1-205ENST00000473969 PGAP3Q96FM1 320 aaPredicted RBP14.26□□□□□ -0.13
USF1-205ENST00000473969 CFAP57Q96MR6 1250 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 TBCBQ99426 244 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 NPY6RQ99463 290 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 DEF6Q9H4E7 631 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 PARVAQ9NVD7 372 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms