RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 PPP2R5DQ14738 602 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 ZC3H12AQ5D1E8 599 aaKnown RBP19.69■□□□□ 0.74
PTCD3-210ENST00000473829 C10orf76Q5T2E6 689 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 ADGRF1Q5T601 910 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 HEATR6Q6AI08 1181 aaKnown RBP19.69■□□□□ 0.74
PTCD3-210ENST00000473829 RFWD3Q6PCD5 774 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 SYT13Q7L8C5 426 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 ASCL5Q7RTU5 278 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 ALYREFQ86V81 257 aaKnown RBP19.69■□□□□ 0.74
PTCD3-210ENST00000473829 UNC45BQ8IWX7 931 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 CCDC33Q8N5R6 958 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 ALLCQ8N6M5 410 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 IL17RCQ8NAC3 791 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 ZNF397Q8NF99 534 aaPredicted RBP19.69■□□□□ 0.74
PTCD3-210ENST00000473829 OLIG1Q8TAK6 271 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 C18orf8Q96DM3 657 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 PRICKLE1Q96MT3 831 aaPredicted RBP19.69■□□□□ 0.74
PTCD3-210ENST00000473829 HHIPQ96QV1 700 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 TTYH3Q9C0H2 523 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 CALCOCO1Q9P1Z2 691 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 PCDHGA2Q9Y5H1 932 aa19.69■□□□□ 0.74
PTCD3-210ENST00000473829 MYO18AQ92614 2054 aaKnown RBP19.69■□□□□ 0.74
PTCD3-210ENST00000473829 ACSL4O60488 711 aa19.68■□□□□ 0.74
PTCD3-210ENST00000473829 MOCS2O96007 188 aaPredicted RBP19.68■□□□□ 0.74
PTCD3-210ENST00000473829 CYBBP04839 570 aa19.68■□□□□ 0.74
PTCD3-210ENST00000473829 HNRNPLP14866 589 aaKnown RBP eCLIP19.68■□□□□ 0.74
PTCD3-210ENST00000473829 TFE3P19532 575 aaPredicted RBP19.68■□□□□ 0.74
PTCD3-210ENST00000473829 SNX16P57768 344 aa19.68■□□□□ 0.74
PTCD3-210ENST00000473829 TPM4P67936 248 aa19.68■□□□□ 0.74
PTCD3-210ENST00000473829 DMC1Q14565 340 aa19.68■□□□□ 0.74
PTCD3-210ENST00000473829 E4F1Q66K89 784 aaPredicted RBP19.68■□□□□ 0.74
PTCD3-210ENST00000473829 TRNP1Q6NT89 227 aa19.68■□□□□ 0.74
PTCD3-210ENST00000473829 ZC3H14Q6PJT7 736 aaKnown RBP19.68■□□□□ 0.74
PTCD3-210ENST00000473829 MMS22LQ6ZRQ5 1243 aa19.68■□□□□ 0.74
PTCD3-210ENST00000473829 ZDHHC17Q8IUH5 632 aa19.68■□□□□ 0.74
PTCD3-210ENST00000473829 SLC30A5Q8TAD4 765 aa19.68■□□□□ 0.74
PTCD3-210ENST00000473829 DDI1Q8WTU0 396 aa19.68■□□□□ 0.74
PTCD3-210ENST00000473829 ACDQ96AP0 544 aa19.68■□□□□ 0.74
PTCD3-210ENST00000473829 FAM126AQ9BYI3 521 aaPredicted RBP19.68■□□□□ 0.74
PTCD3-210ENST00000473829 FAM204AQ9H8W3 233 aa19.68■□□□□ 0.74
PTCD3-210ENST00000473829 SLC8A2Q9UPR5 921 aa19.68■□□□□ 0.74
PTCD3-210ENST00000473829 SYNJ2BP-COX16A0A087WUM0 186 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 LRRC53A6NM62 1247 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 GOLGA6L19H0YKK7 550 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 GOLGA8SH3BPF8 625 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 KLF8O95600 359 aaPredicted RBP19.67■□□□□ 0.74
PTCD3-210ENST00000473829 UNGP13051 313 aaPredicted RBP19.67■□□□□ 0.74
PTCD3-210ENST00000473829 MMP8P22894 467 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 SCNN1AP37088 669 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 PBX1P40424 430 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 SLC11A2P49281 568 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 MRPS21P82921 87 aaKnown RBP19.67■□□□□ 0.74
PTCD3-210ENST00000473829 CDK17Q00537 523 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 GEN1Q17RS7 908 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 MPPE1Q53F39 396 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 FAM102AQ5T9C2 384 aaPredicted RBP19.67■□□□□ 0.74
PTCD3-210ENST00000473829 EGFLAMQ63HQ2 1017 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 IRF2BP2Q7Z5L9 587 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 TXNDC5Q8NBS9 432 aaKnown RBP19.67■□□□□ 0.74
PTCD3-210ENST00000473829 AZIN2Q96A70 460 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 NUCKS1Q9H1E3 243 aaKnown RBP19.67■□□□□ 0.74
PTCD3-210ENST00000473829 DDIT4Q9NX09 232 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 COX16Q9P0S2 106 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 MMP17Q9ULZ9 603 aa19.67■□□□□ 0.74
PTCD3-210ENST00000473829 PRR23AA6NEV1 266 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 SGK1O00141 431 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 ADAM23O75077 832 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 FERP16591 822 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 HOXA6P31267 233 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 HOXD11P31277 338 aaPredicted RBP19.66■□□□□ 0.74
PTCD3-210ENST00000473829 NOS2P35228 1153 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 FLT3P36888 993 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 MATKP42679 507 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 RNASE9P60153 205 aaKnown RBP19.66■□□□□ 0.74
PTCD3-210ENST00000473829 PTP4A2Q12974 167 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 SRSF5Q13243 272 aaKnown RBP19.66■□□□□ 0.74
PTCD3-210ENST00000473829 CLEC16AQ2KHT3 1053 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 PREPLQ4J6C6 727 aaPredicted RBP19.66■□□□□ 0.74
PTCD3-210ENST00000473829 PIK3R6Q5UE93 754 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 TMEM92Q6UXU6 159 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 TRIM72Q6ZMU5 477 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 PHLDB2Q86SQ0 1253 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 CCDC26Q8TAB7 109 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 WFDC5Q8TCV5 224 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 ATRIPQ8WXE1 791 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 NKD2Q969F2 451 aaPredicted RBP19.66■□□□□ 0.74
PTCD3-210ENST00000473829 NPY6RQ99463 290 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 AGPAT1Q99943 283 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 C11orf70Q9BRQ4 267 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 SYT11Q9BT88 431 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 MYO6Q9UM54 1294 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 SLC27A6Q9Y2P4 619 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 PIEZO1Q92508 2521 aa19.66■□□□□ 0.74
PTCD3-210ENST00000473829 FRYLO94915 3013 aa19.65■□□□□ 0.74
PTCD3-210ENST00000473829 ZFHX2Q9C0A1 2572 aaPredicted RBP19.65■□□□□ 0.74
PTCD3-210ENST00000473829 APOEP02649 317 aa19.65■□□□□ 0.74
PTCD3-210ENST00000473829 NRLP54845 237 aa19.65■□□□□ 0.74
PTCD3-210ENST00000473829 UBASH3AP57075 661 aa19.65■□□□□ 0.74
PTCD3-210ENST00000473829 ZNF445P59923 1031 aa19.65■□□□□ 0.74
PTCD3-210ENST00000473829 CENPCQ03188 943 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms