RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 UBE2HP62256 183 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 ENPP2Q13822 863 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 ZNF234Q14588 700 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 TRIM61Q5EBN2 209 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 NADSYN1Q6IA69 706 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 SDE2Q6IQ49 451 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 MSANTD2Q6P1R3 559 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 CACUL1Q86Y37 369 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 SCUBE3Q8IX30 993 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 RWDD2AQ9UIY3 292 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 STOML2Q9UJZ1 356 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 PILRBQ9UKJ0 227 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 NAALADL1Q9UQQ1 740 aa17.39■□□□□ 0.37
USP40-212ENST00000473191 HBS1LQ9Y450 684 aaKnown RBP17.39■□□□□ 0.37
USP40-212ENST00000473191 MUC22E2RYF6 1773 aaPredicted RBP17.38■□□□□ 0.37
USP40-212ENST00000473191 KCNJ18B7U540 433 aa17.38■□□□□ 0.37
USP40-212ENST00000473191 GNA14O95837 355 aa17.38■□□□□ 0.37
USP40-212ENST00000473191 CYBBP04839 570 aa17.38■□□□□ 0.37
USP40-212ENST00000473191 HLA-EP13747 358 aa17.38■□□□□ 0.37
USP40-212ENST00000473191 HARS2P49590 506 aaKnown RBP17.38■□□□□ 0.37
USP40-212ENST00000473191 CETN1Q12798 172 aa17.38■□□□□ 0.37
USP40-212ENST00000473191 FAM133BQ5BKY9 247 aaKnown RBP17.38■□□□□ 0.37
USP40-212ENST00000473191 LYSMD4Q5XG99 296 aa17.38■□□□□ 0.37
USP40-212ENST00000473191 KIAA1324Q6UXG2 1013 aaKnown RBP17.38■□□□□ 0.37
USP40-212ENST00000473191 ANKS1BQ7Z6G8 1248 aa17.38■□□□□ 0.37
USP40-212ENST00000473191 ZNF366Q8N895 744 aa17.38■□□□□ 0.37
USP40-212ENST00000473191 TRIML1Q8N9V2 468 aa17.38■□□□□ 0.37
USP40-212ENST00000473191 ADAM32Q8TC27 787 aa17.38■□□□□ 0.37
USP40-212ENST00000473191 CYB5D2Q8WUJ1 264 aa17.38■□□□□ 0.37
USP40-212ENST00000473191 CIPCQ9C0C6 399 aa17.38■□□□□ 0.37
USP40-212ENST00000473191 ELOVL2Q9NXB9 296 aa17.38■□□□□ 0.37
USP40-212ENST00000473191 XPO7Q9UIA9 1087 aaKnown RBP17.38■□□□□ 0.37
USP40-212ENST00000473191 SPTBN2O15020 2390 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 LETM1O95202 739 aaPredicted RBP17.37■□□□□ 0.37
USP40-212ENST00000473191 KCNK5O95279 499 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 RPL34P49207 117 aaKnown RBP17.37■□□□□ 0.37
USP40-212ENST00000473191 COPAP53621 1224 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 PITX1P78337 314 aaPredicted RBP17.37■□□□□ 0.37
USP40-212ENST00000473191 ZNF33AQ06730 810 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 ARHGAP44Q17R89 818 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 MPPE1Q53F39 396 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 SYPL2Q5VXT5 272 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 PSAPL1Q6NUJ1 521 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 TRIM65Q6PJ69 517 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 SYT12Q8IV01 421 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 OR2I1PQ8NGU4 316 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 ZNF606Q8WXB4 792 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 IRGQQ8WZA9 623 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 TMA16Q96EY4 203 aaKnown RBP17.37■□□□□ 0.37
USP40-212ENST00000473191 HSFY1Q96LI6 401 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 PRICKLE1Q96MT3 831 aaPredicted RBP17.37■□□□□ 0.37
USP40-212ENST00000473191 ST7Q9NRC1 585 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 ABCB8Q9NUT2 735 aa17.37■□□□□ 0.37
USP40-212ENST00000473191 PAPSS1O43252 624 aaPredicted RBP17.36■□□□□ 0.37
USP40-212ENST00000473191 PNMA6AP0CW24 399 aaPredicted RBP17.36■□□□□ 0.37
USP40-212ENST00000473191 NCAM1P13591 858 aa17.36■□□□□ 0.37
USP40-212ENST00000473191 ENGP17813 658 aa17.36■□□□□ 0.37
USP40-212ENST00000473191 MAOBP27338 520 aa17.36■□□□□ 0.37
USP40-212ENST00000473191 CD70P32970 193 aa17.36■□□□□ 0.37
USP40-212ENST00000473191 MAPK8P45983 427 aa17.36■□□□□ 0.37
USP40-212ENST00000473191 STILQ15468 1287 aa17.36■□□□□ 0.37
USP40-212ENST00000473191 TAF5Q15542 800 aa17.36■□□□□ 0.37
USP40-212ENST00000473191 UAP1L1Q3KQV9 507 aa17.36■□□□□ 0.37
USP40-212ENST00000473191 ADGRF1Q5T601 910 aa17.36■□□□□ 0.37
USP40-212ENST00000473191 PEAR1Q5VY43 1037 aaPredicted RBP17.36■□□□□ 0.37
USP40-212ENST00000473191 ADIPOR2Q86V24 386 aa17.36■□□□□ 0.37
USP40-212ENST00000473191 WDTC1Q8N5D0 677 aa17.36■□□□□ 0.37
USP40-212ENST00000473191 DQX1Q8TE96 717 aaKnown RBP17.36■□□□□ 0.37
USP40-212ENST00000473191 FCRL2Q96LA5 508 aaPredicted RBP17.36■□□□□ 0.37
USP40-212ENST00000473191 HSPA12BQ96MM6 686 aa17.36■□□□□ 0.37
USP40-212ENST00000473191 PCDH15Q96QU1 1955 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 E5RJQ4 531 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 AP5Z1O43299 807 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 TBL1XO60907 577 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 TBX4P57082 545 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 BYSLQ13895 437 aaKnown RBP17.35■□□□□ 0.37
USP40-212ENST00000473191 PTPRNQ16849 979 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 HSP90AA4PQ58FG1 418 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 PIK3R6Q5UE93 754 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 SLC23A3Q6PIS1 610 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 CHST9Q7L1S5 443 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 TAC4Q86UU9 113 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 TMPRSS6Q8IU80 811 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 SLC4A5Q9BY07 1137 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 NUCKS1Q9H1E3 243 aaKnown RBP17.35■□□□□ 0.37
USP40-212ENST00000473191 MTG2Q9H4K7 406 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 PRDM16Q9HAZ2 1276 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 SIX2Q9NPC8 291 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 TMEM9BQ9NQ34 198 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 CHMP5Q9NZZ3 219 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 STIM2Q9P246 746 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 EVLQ9UI08 416 aaPredicted RBP17.35■□□□□ 0.37
USP40-212ENST00000473191 CKAP5Q14008 2032 aa17.35■□□□□ 0.37
USP40-212ENST00000473191 FAM170AA1A519 330 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 THAP12O43422 761 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 ACSL4O60488 711 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 ZNF217O75362 1048 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 CFIP05156 583 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 EPHX1P07099 455 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 PON1P27169 355 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms