RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 MARK1Q9P0L2 795 aa20.76■□□□□ 0.91
SF1-213ENST00000472725 UVRAGQ9P2Y5 699 aa20.76■□□□□ 0.91
SF1-213ENST00000472725 EPN1Q9Y6I3 576 aaPredicted RBP20.76■□□□□ 0.91
SF1-213ENST00000472725 ACSL4O60488 711 aa20.75■□□□□ 0.91
SF1-213ENST00000472725 ARSAP15289 507 aa20.75■□□□□ 0.91
SF1-213ENST00000472725 RPL7AP62424 266 aaKnown RBP20.75■□□□□ 0.91
SF1-213ENST00000472725 GAD2Q05329 585 aa20.75■□□□□ 0.91
SF1-213ENST00000472725 NME3Q13232 169 aa20.75■□□□□ 0.91
SF1-213ENST00000472725 DHCR24Q15392 516 aa20.75■□□□□ 0.91
SF1-213ENST00000472725 MLF2Q15773 248 aaPredicted RBP20.75■□□□□ 0.91
SF1-213ENST00000472725 ZC3H12AQ5D1E8 599 aaKnown RBP20.75■□□□□ 0.91
SF1-213ENST00000472725 TRIM68Q6AZZ1 485 aa20.75■□□□□ 0.91
SF1-213ENST00000472725 TRIM67Q6ZTA4 783 aa20.75■□□□□ 0.91
SF1-213ENST00000472725 ARHGEF3Q9NR81 526 aa20.75■□□□□ 0.91
SF1-213ENST00000472725 PIGVQ9NUD9 493 aa20.75■□□□□ 0.91
SF1-213ENST00000472725 ARHGEF38Q9NXL2 777 aa20.75■□□□□ 0.91
SF1-213ENST00000472725 GTSE1Q9NYZ3 720 aa20.75■□□□□ 0.91
SF1-213ENST00000472725 MYO1AQ9UBC5 1043 aa20.75■□□□□ 0.91
SF1-213ENST00000472725 HOXC11O43248 304 aaPredicted RBP20.74■□□□□ 0.91
SF1-213ENST00000472725 ATMINO43313 823 aaPredicted RBP20.74■□□□□ 0.91
SF1-213ENST00000472725 NDUFA10O95299 355 aa20.74■□□□□ 0.91
SF1-213ENST00000472725 CYP17A1P05093 508 aa20.74■□□□□ 0.91
SF1-213ENST00000472725 EIF2DP41214 584 aaKnown RBP20.74■□□□□ 0.91
SF1-213ENST00000472725 STARD6P59095 220 aa20.74■□□□□ 0.91
SF1-213ENST00000472725 TNK2Q07912 1038 aa20.74■□□□□ 0.91
SF1-213ENST00000472725 RHBDF2Q6PJF5 856 aa20.74■□□□□ 0.91
SF1-213ENST00000472725 TMEM139Q8IV31 216 aa20.74■□□□□ 0.91
SF1-213ENST00000472725 NELL2Q99435 816 aa20.74■□□□□ 0.91
SF1-213ENST00000472725 GJB6O95452 261 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 CYBBP04839 570 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 CTHP32929 405 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 MAGEA1P43355 309 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 AIF1P55008 147 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 ATP11AP98196 1134 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 PIGHQ14442 188 aaPredicted RBP20.73■□□□□ 0.91
SF1-213ENST00000472725 TCEAL1Q15170 157 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 ARL13BQ3SXY8 428 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 PREPLQ4J6C6 727 aaPredicted RBP20.73■□□□□ 0.91
SF1-213ENST00000472725 LY6G5CQ5SRR4 150 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 MPP7Q5T2T1 576 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 DNAAF5Q86Y56 855 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 RHOT2Q8IXI1 618 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 TXLNBQ8N3L3 684 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 FAM172AQ8WUF8 416 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 NUP85Q9BW27 656 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 ADAM33Q9BZ11 813 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 HEBP1Q9NRV9 189 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 MRPS17Q9Y2R5 130 aaKnown RBP20.73■□□□□ 0.91
SF1-213ENST00000472725 PIAS3Q9Y6X2 628 aa20.73■□□□□ 0.91
SF1-213ENST00000472725 TTC28Q96AY4 2481 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 SYNJ2BP-COX16A0A087WUM0 186 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 SOWAHDA6NJG2 315 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 SPECC1L-ADORA2AF8WAN1 911 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 GFRA2O00451 464 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 NRDCO43847 1150 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 RNF8O76064 485 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 ADH5P11766 374 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 TFE3P19532 575 aaPredicted RBP20.72■□□□□ 0.91
SF1-213ENST00000472725 PSMA2P25787 234 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 GJA4P35212 333 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 C15orf59Q2T9L4 293 aaPredicted RBP20.72■□□□□ 0.91
SF1-213ENST00000472725 MPPE1Q53F39 396 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 ZNF852Q6ZMS4 543 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 SUGP1Q8IWZ8 645 aaKnown RBP20.72■□□□□ 0.91
SF1-213ENST00000472725 ZNF557Q8N988 423 aaPredicted RBP20.72■□□□□ 0.91
SF1-213ENST00000472725 NTAN1Q96AB6 310 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 C1orf74Q96LT6 269 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 HAPLN3Q96S86 360 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 COX16Q9P0S2 106 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 CALCOCO1Q9P1Z2 691 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 IP6K2Q9UHH9 426 aa20.72■□□□□ 0.91
SF1-213ENST00000472725 OTOL1A6NHN0 477 aaPredicted RBP20.71■□□□□ 0.91
SF1-213ENST00000472725 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.71■□□□□ 0.91
SF1-213ENST00000472725 MYO1FO00160 1098 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 SCAMP3O14828 347 aaKnown RBP20.71■□□□□ 0.91
SF1-213ENST00000472725 CCP110O43303 1012 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 MTA2O94776 668 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 HDAC4P56524 1084 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 KRT83P78385 493 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 CDO1Q16878 200 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 TPRG1Q6ZUI0 275 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 BMP8AQ7Z5Y6 402 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 TMEM25Q86YD3 366 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 SIX5Q8N196 739 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 NIPA2Q8N8Q9 360 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 RFFLQ8WZ73 363 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 ARHGEF26Q96DR7 871 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 CALR3Q96L12 384 aaKnown RBP20.71■□□□□ 0.91
SF1-213ENST00000472725 XPO6Q96QU8 1125 aaKnown RBP20.71■□□□□ 0.91
SF1-213ENST00000472725 PACSIN1Q9BY11 444 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 OSBPL6Q9BZF3 934 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 TKTL2Q9H0I9 626 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 CTTNBP2NLQ9P2B4 639 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 CA14Q9ULX7 337 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 PCDHA13Q9Y5I0 950 aa20.71■□□□□ 0.91
SF1-213ENST00000472725 MYOFQ9NZM1 2061 aa20.7■□□□□ 0.9
SF1-213ENST00000472725 TYW5A2RUC4 315 aaKnown RBP20.7■□□□□ 0.9
SF1-213ENST00000472725 KRBA1A5PL33 1030 aa20.7■□□□□ 0.9
SF1-213ENST00000472725 TRDMT1O14717 391 aaKnown RBP20.7■□□□□ 0.9
SF1-213ENST00000472725 MOCS2O96007 188 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms