RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 TMEM35BQ8NCS4 154 aa15.41■□□□□ 0.06
SSR4-208ENST00000471880 HMGB4Q8WW32 186 aa15.41■□□□□ 0.06
SSR4-208ENST00000471880 GAB3Q8WWW8 586 aa15.41■□□□□ 0.06
SSR4-208ENST00000471880 TMA16Q96EY4 203 aaKnown RBP15.41■□□□□ 0.06
SSR4-208ENST00000471880 PIWIL1Q96J94 861 aaKnown RBP15.41■□□□□ 0.06
SSR4-208ENST00000471880 STK33Q9BYT3 514 aa15.41■□□□□ 0.06
SSR4-208ENST00000471880 NUP205Q92621 2012 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 GOLGA6L7A0A1B0GV03 622 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 SYCE3A1L190 88 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 SMTNL1A8MU46 457 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 LGALS16A8MUM7 142 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 PRRT4C9JH25 899 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 TBL1XO60907 577 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 ERBB2P04626 1255 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 NTSR1P30989 418 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 HOXA6P31267 233 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 KIR2DL1P43626 348 aaPredicted RBP15.4■□□□□ 0.06
SSR4-208ENST00000471880 CDK17Q00537 523 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 HSF5Q4G112 596 aaPredicted RBP15.4■□□□□ 0.06
SSR4-208ENST00000471880 EFHC1Q5JVL4 640 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 ADGRF1Q5T601 910 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 LAIR1Q6GTX8 287 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 ANKS1BQ7Z6G8 1248 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 CCDC117Q8IWD4 279 aaPredicted RBP15.4■□□□□ 0.06
SSR4-208ENST00000471880 MSANTD4Q8NCY6 345 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 UCMAQ8WVF2 138 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 DDX50Q9BQ39 737 aaKnown RBP15.4■□□□□ 0.06
SSR4-208ENST00000471880 GANQ9H2C0 597 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 LHX5Q9H2C1 402 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 SEPT11Q9NVA2 429 aaKnown RBP15.4■□□□□ 0.06
SSR4-208ENST00000471880 CACNA2D2Q9NY47 1150 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 LIMA1Q9UHB6 759 aaKnown RBP15.4■□□□□ 0.06
SSR4-208ENST00000471880 THADAQ6YHU6 1953 aa15.4■□□□□ 0.06
SSR4-208ENST00000471880 CEP192Q8TEP8 1941 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 GON4LQ3T8J9 2241 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 GOLGA8SH3BPF8 625 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 DCLK1O15075 740 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 ACSL4O60488 711 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 TRUB2O95900 331 aaKnown RBP15.39■□□□□ 0.05
SSR4-208ENST00000471880 PENKP01210 267 aaPredicted RBP15.39■□□□□ 0.05
SSR4-208ENST00000471880 FYNP06241 537 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 MMEP08473 750 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 ATP1A3P13637 1013 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 RPL34P49207 117 aaKnown RBP15.39■□□□□ 0.05
SSR4-208ENST00000471880 ZNF165P49910 485 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 SPEM2Q0P670 501 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 NME3Q13232 169 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 GEN1Q17RS7 908 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 PTPN20Q4JDL3 420 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 USP39Q53GS9 565 aaKnown RBP15.39■□□□□ 0.05
SSR4-208ENST00000471880 CACNA2D4Q7Z3S7 1137 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 NOP9Q86U38 636 aaKnown RBP15.39■□□□□ 0.05
SSR4-208ENST00000471880 KBTBD6Q86V97 674 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 CHSY1Q86X52 802 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 DEFB106AQ8N104 65 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 FAM160A2Q8N612 972 aaPredicted RBP15.39■□□□□ 0.05
SSR4-208ENST00000471880 MDGA1Q8NFP4 955 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 ACOX2Q99424 681 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 NAA15Q9BXJ9 866 aaKnown RBP15.39■□□□□ 0.05
SSR4-208ENST00000471880 DDIT4Q9NX09 232 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 TLR6Q9Y2C9 796 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 RAD54BQ9Y620 910 aa15.39■□□□□ 0.05
SSR4-208ENST00000471880 A0A0A0MRY4 1105 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 CCDC163A0A0D9SF12 145 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 EPHB6O15197 1021 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 MAP3K13O43283 966 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 HSF2BPO75031 334 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 ADAM23O75077 832 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 LATS1O95835 1130 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 CISD3P0C7P0 127 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 HNRNPLP14866 589 aaKnown RBP eCLIP15.38■□□□□ 0.05
SSR4-208ENST00000471880 SOX5P35711 763 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 STAT1P42224 750 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 SGSHP51688 502 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 ZNF445P59923 1031 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 PITX1P78337 314 aaPredicted RBP15.38■□□□□ 0.05
SSR4-208ENST00000471880 RING1Q06587 406 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 NCAPHQ15003 741 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 ELF2Q15723 593 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 C2CD6Q53TS8 623 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 ZC3H12AQ5D1E8 599 aaKnown RBP15.38■□□□□ 0.05
SSR4-208ENST00000471880 FAM102AQ5T9C2 384 aaPredicted RBP15.38■□□□□ 0.05
SSR4-208ENST00000471880 NAA35Q5VZE5 725 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 DPY19L2P1Q6NXN4 242 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 ERICH1Q86X53 443 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 CARNMT1Q8N4J0 409 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 SLC20A1Q8WUM9 679 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 CPA5Q8WXQ8 436 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 SPACA7Q96KW9 195 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 FCRL2Q96LA5 508 aaPredicted RBP15.38■□□□□ 0.05
SSR4-208ENST00000471880 SLC12A6Q9UHW9 1150 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 CLEC4EQ9ULY5 219 aa15.38■□□□□ 0.05
SSR4-208ENST00000471880 PLXND1Q9Y4D7 1925 aa15.37■□□□□ 0.05
SSR4-208ENST00000471880 IRAK2O43187 625 aa15.37■□□□□ 0.05
SSR4-208ENST00000471880 IGLV3-27P01718 113 aa15.37■□□□□ 0.05
SSR4-208ENST00000471880 PTMSP20962 102 aa15.37■□□□□ 0.05
SSR4-208ENST00000471880 ABCB4P21439 1286 aa15.37■□□□□ 0.05
SSR4-208ENST00000471880 HOXD9P28356 352 aaPredicted RBP15.37■□□□□ 0.05
SSR4-208ENST00000471880 SLC6A4P31645 630 aa15.37■□□□□ 0.05
SSR4-208ENST00000471880 TPM4P67936 248 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms