RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 TLDC1Q6P9B6 456 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4□□□□□ -1.77
PRPF40A-207ENST00000471701 MYO1HQ8N1T3 1032 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 ASB5Q8WWX0 329 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 OVCA2Q8WZ82 227 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 IQCDQ96DY2 449 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 CTAGE1Q96RT6 745 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 EIF3CQ99613 913 aaKnown RBP4□□□□□ -1.77
PRPF40A-207ENST00000471701 BTBD1Q9H0C5 482 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 SLCO5A1Q9H2Y9 848 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 PNPLA8Q9NP80 782 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 AGO2Q9UKV8 859 aaKnown RBP4□□□□□ -1.77
PRPF40A-207ENST00000471701 EMSYQ7Z589 1322 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 A0A1W2PPC1 479 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 F8W8V4 182 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 GTPBP1O00178 669 aaKnown RBP3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 PRYO14603 147 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 IL18RAPO95256 599 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 FGF2P09038 288 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 GSTM5P46439 218 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 POLD2P49005 469 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 ZXDBP98169 803 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 GAB1Q13480 694 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 SEMA5AQ13591 1074 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 ELF2Q15723 593 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 PLEKHG6Q3KR16 790 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 ANXA2RQ3ZCQ2 193 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 ZNF585BQ52M93 769 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 FAXCQ5TGI0 409 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 LIPMQ5VYY2 423 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 DHRS13Q6UX07 377 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 B4GALNT2Q8NHY0 566 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 CENPIQ92674 756 aaPredicted RBP3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 PHKBQ93100 1093 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 GJA10Q969M2 543 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 LRRC46Q96FV0 321 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 ZNF845Q96IR2 970 aaPredicted RBP3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 THSD1Q9NS62 852 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 RXFP3Q9NSD7 469 aa3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 TRIP12Q14669 1992 aaPredicted RBP3.99□□□□□ -1.77
PRPF40A-207ENST00000471701 KIR2DS5A0A0G2JLQ3 304 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 RHPN2P1A8MT19 583 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 VSTM5A8MXK1 200 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 KIR2DS3K7RE56 304 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 SLC28A2O43868 658 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 NGFRP08138 427 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 IDEP14735 1019 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 CIITAP33076 1130 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 MLH1P40692 756 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 SOX2P48431 317 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 AGTR2P50052 363 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 ZNF84P51523 738 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 RHDQ02161 417 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 DAG1Q14118 895 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 GRM3Q14832 879 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 SMTNL2Q2TAL5 461 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 P3H1Q32P28 736 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 TMEM196Q5HYL7 178 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 ABLIM2Q6H8Q1 611 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 ACSM6Q6P461 480 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 CRTC1Q6UUV9 634 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 DLK2Q6UY11 383 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 KYAT3Q6YP21 454 aaKnown RBP3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 RFX6Q8HWS3 928 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 FBXL14Q8N1E6 418 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 ARL14EPQ8N8R7 260 aaPredicted RBP3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 FAM47BQ8NA70 645 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 ATP11CQ8NB49 1132 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 OR52L2PQ8NGH6 319 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 LPAR1Q92633 364 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 SF3B5Q9BWJ5 86 aaKnown RBP3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 GATA5Q9BWX5 397 aaPredicted RBP3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 RBM38Q9H0Z9 239 aaKnown RBP3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 PCDHGB6Q9Y5F9 930 aa3.98□□□□□ -1.77
PRPF40A-207ENST00000471701 C4orf47A7E2U8 309 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 SGPL1O95470 568 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 RHCEP18577 417 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 NDUFS1P28331 727 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 SLC8A1P32418 973 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 STAT6P42226 847 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 P2RX3P56373 397 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 GAD2Q05329 585 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 GBX1Q14549 363 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 FAM90A2PQ658T7 463 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 ISM2Q6H9L7 571 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 MRNIPQ6NTE8 343 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 CCDC144NLQ6NUI1 221 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 BEND5Q7L4P6 421 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 RHPN2Q8IUC4 686 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 DCP1BQ8IZD4 617 aaKnown RBP3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 IQCF1Q8N6M8 205 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 TMEM174Q8WUU8 243 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 JDP2Q8WYK2 163 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 GRAMD1AQ96CP6 724 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 WDR24Q96S15 920 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 MEIS3Q99687 375 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 PIMREGQ9BSJ6 248 aa3.97□□□□□ -1.77
PRPF40A-207ENST00000471701 APOL5Q9BWW9 433 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms