RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 FAM49BQ9NUQ9 324 aa9.59□□□□□ -0.87
CPSF4-211ENST00000471455 NAGPAQ9UK23 515 aa9.59□□□□□ -0.87
CPSF4-211ENST00000471455 FRMD4BQ9Y2L6 1034 aa9.59□□□□□ -0.87
CPSF4-211ENST00000471455 SLC27A6Q9Y2P4 619 aa9.59□□□□□ -0.87
CPSF4-211ENST00000471455 RAD54BQ9Y620 910 aa9.59□□□□□ -0.87
CPSF4-211ENST00000471455 STON1Q9Y6Q2 735 aa9.59□□□□□ -0.87
CPSF4-211ENST00000471455 MYH10P35580 1976 aa9.59□□□□□ -0.87
CPSF4-211ENST00000471455 ADAMTS9Q9P2N4 1935 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 APC2O95996 2303 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 PRRT4C9JH25 899 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 IKBKBO14920 756 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 TRIM24O15164 1050 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 BCAT2O15382 392 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 FLRT2O43155 660 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 CYP26A1O43174 497 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 GREM1O60565 184 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 GJB3O75712 270 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 KIF20AO95235 890 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 C4BPAP04003 597 aaKnown RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 ACO1P21399 889 aaKnown RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 ADORA2BP29275 332 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 MATKP42679 507 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 CASP4P49662 377 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 FAM193AP78312 1265 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 SCAPQ12770 1279 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 SUZ12Q15022 739 aaKnown RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 INAVAQ3KP66 663 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 ZACNQ401N2 412 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 FUT11Q495W5 492 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 CCNI2Q6ZMN8 369 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 CLEC20AQ6ZU45 233 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 TOGARAM2Q6ZUX3 1019 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 CCDC186Q7Z3E2 898 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 GLRX5Q86SX6 157 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 ZNF276Q8N554 614 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 ZCCHC9Q8N567 271 aaKnown RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 TTC39CQ8N584 583 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 ZMIZ2Q8NF64 920 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 OR2I1PQ8NGU4 316 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 SETD7Q8WTS6 366 aaKnown RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 TMEM174Q8WUU8 243 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 DNASE2BQ8WZ79 361 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 PRCCQ92733 491 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 JAKMIP2Q96AA8 810 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 SIPA1Q96FS4 1042 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 HNRNPABQ99729 332 aaKnown RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 NT5C1AQ9BXI3 368 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 GZF1Q9H116 711 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 MIR1-1HGQ9H1L0 117 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 CYP3A43Q9HB55 503 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 SLC39A2Q9NP94 309 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 EXOC1Q9NV70 894 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 WSB2Q9NYS7 404 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 CLIC5Q9NZA1 410 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 KIAA1522Q9P206 1035 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 USP36Q9P275 1121 aaKnown RBP9.58□□□□□ -0.88
CPSF4-211ENST00000471455 HCN2Q9UL51 889 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 STRIP2Q9ULQ0 834 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 PCDHGB2Q9Y5G2 931 aa9.58□□□□□ -0.88
CPSF4-211ENST00000471455 A0A1W2PQH9 124 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 TAF4O00268 1085 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 POLR2DO15514 142 aaKnown RBP9.57□□□□□ -0.88
CPSF4-211ENST00000471455 TIMM44O43615 452 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 BEST1O76090 585 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 TBX18O95935 607 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 ASS1P00966 412 aaKnown RBP9.57□□□□□ -0.88
CPSF4-211ENST00000471455 PENKP01210 267 aaPredicted RBP9.57□□□□□ -0.88
CPSF4-211ENST00000471455 CISD3P0C7P0 127 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 ASPAP45381 313 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 MFAP3P55082 362 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 SLC8A3P57103 927 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 ZNF445P59923 1031 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 INCA1Q0VD86 236 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 TEAD4Q15561 434 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 LCE2CQ5TA81 110 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 DCAF12L1Q5VU92 463 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 RSRC2Q7L4I2 434 aaKnown RBP9.57□□□□□ -0.88
CPSF4-211ENST00000471455 GALNT15Q8N3T1 639 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 BHMTQ93088 406 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 WBP2Q969T9 261 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 CYFIP2Q96F07 1278 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 NUP58Q9BVL2 599 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 GPR174Q9BXC1 333 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 BACH2Q9BYV9 841 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 SLC2A11Q9BYW1 496 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 SDCBP2Q9H190 292 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 BLZF1Q9H2G9 400 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 GAREM1Q9H706 876 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 FBRSQ9HAH7 460 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 ITM2CQ9NQX7 267 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 THAP10Q9P2Z0 257 aaPredicted RBP9.57□□□□□ -0.88
CPSF4-211ENST00000471455 RASAL2Q9UJF2 1139 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 FBXO10Q9UK96 956 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 PCOLCE2Q9UKZ9 415 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 AKAP13Q12802 2813 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 ZZEF1O43149 2961 aa9.57□□□□□ -0.88
CPSF4-211ENST00000471455 EIF4E1BA6NMX2 242 aaKnown RBP9.56□□□□□ -0.88
CPSF4-211ENST00000471455 METTL12A8MUP2 240 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms