RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 JOSD2Q8TAC2 188 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 EZH1Q92800 747 aaPredicted RBP20.53■□□□□ 0.88
HDAC7-220ENST00000471235 BHMTQ93088 406 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 NT5C3BQ969T7 300 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 EXOC4Q96A65 974 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 TBCBQ99426 244 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 DNAJC7Q99615 494 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 CHRDQ9H2X0 955 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 LMAN1LQ9HAT1 526 aa20.53■□□□□ 0.88
HDAC7-220ENST00000471235 BZW2Q9Y6E2 419 aaKnown RBP20.53■□□□□ 0.88
HDAC7-220ENST00000471235 NYNRINQ9P2P1 1898 aaKnown RBP20.53■□□□□ 0.88
HDAC7-220ENST00000471235 MUC22E2RYF6 1773 aaPredicted RBP20.52■□□□□ 0.88
HDAC7-220ENST00000471235 M0QYT0 321 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 MFAP3LO75121 409 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 TULP3O75386 442 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 PENKP01210 267 aaPredicted RBP20.52■□□□□ 0.88
HDAC7-220ENST00000471235 TPM1P09493 284 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 DRD1P21728 446 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 SLC6A4P31645 630 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 GBP1P32455 592 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 SLC11A2P49281 568 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 ZNF75DP51815 510 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 MESP2Q0VG99 397 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 TBX2Q13207 712 aaPredicted RBP20.52■□□□□ 0.88
HDAC7-220ENST00000471235 NME3Q13232 169 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 DGKKQ5KSL6 1271 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 ADGRF1Q5T601 910 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 FYB2Q5VWT5 728 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 Q6ZS52 159 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 NAT16Q8N8M0 369 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 DTWD2Q8NBA8 298 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 AZIN2Q96A70 460 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 CFAP57Q96MR6 1250 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 ANP32EQ9BTT0 268 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 SELENOOQ9BVL4 669 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 PIGVQ9NUD9 493 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 PLK2Q9NYY3 685 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 ARHGAP20Q9P2F6 1191 aa20.52■□□□□ 0.88
HDAC7-220ENST00000471235 XPO7Q9UIA9 1087 aaKnown RBP20.52■□□□□ 0.88
HDAC7-220ENST00000471235 GOLGA6L7A0A1B0GV03 622 aa20.51■□□□□ 0.87
HDAC7-220ENST00000471235 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.51■□□□□ 0.87
HDAC7-220ENST00000471235 GZMAP12544 262 aa20.51■□□□□ 0.87
HDAC7-220ENST00000471235 RRM1P23921 792 aa20.51■□□□□ 0.87
HDAC7-220ENST00000471235 SLC25A52Q3SY17 297 aa20.51■□□□□ 0.87
HDAC7-220ENST00000471235 DNAJC24Q6P3W2 148 aa20.51■□□□□ 0.87
HDAC7-220ENST00000471235 BNIPLQ7Z465 357 aa20.51■□□□□ 0.87
HDAC7-220ENST00000471235 PGAP3Q96FM1 320 aaPredicted RBP20.51■□□□□ 0.87
HDAC7-220ENST00000471235 PNKPQ96T60 521 aa20.51■□□□□ 0.87
HDAC7-220ENST00000471235 ABHD10Q9NUJ1 306 aa20.51■□□□□ 0.87
HDAC7-220ENST00000471235 DNAJC17Q9NVM6 304 aaKnown RBP20.51■□□□□ 0.87
HDAC7-220ENST00000471235 EML5Q05BV3 1969 aa20.51■□□□□ 0.87
HDAC7-220ENST00000471235 C2CD4BA6NLJ0 364 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 KCNU1A8MYU2 1149 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 ATMINO43313 823 aaPredicted RBP20.5■□□□□ 0.87
HDAC7-220ENST00000471235 TSPAN3O60637 253 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 CYBBP04839 570 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 KRT3P12035 628 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 CCR1P32246 355 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 SGSHP51688 502 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 NUBP1P53384 320 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 PPP2R5DQ14738 602 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 PPP1R15BQ5SWA1 713 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 RFWD3Q6PCD5 774 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 WDR59Q6PJI9 974 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 VPS36Q86VN1 386 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 SFTPA1Q8IWL2 248 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 ATP6V0D2Q8N8Y2 350 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 OR8K1Q8NGG5 319 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 RXFP2Q8WXD0 754 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 MRFAP1L1Q96HT8 127 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 VCPIP1Q96JH7 1222 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 BTN2A3PQ96KV6 586 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 PRICKLE1Q96MT3 831 aaPredicted RBP20.5■□□□□ 0.87
HDAC7-220ENST00000471235 XPO6Q96QU8 1125 aaKnown RBP20.5■□□□□ 0.87
HDAC7-220ENST00000471235 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.5■□□□□ 0.87
HDAC7-220ENST00000471235 ARHGEF4Q9NR80 690 aa20.5■□□□□ 0.87
HDAC7-220ENST00000471235 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.5■□□□□ 0.87
HDAC7-220ENST00000471235 TRIM24O15164 1050 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 GALR2O43603 387 aaPredicted RBP20.49■□□□□ 0.87
HDAC7-220ENST00000471235 RTN2O75298 545 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 KAT7O95251 611 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 FTLP02792 175 aaPredicted RBP20.49■□□□□ 0.87
HDAC7-220ENST00000471235 APODP05090 189 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 SLC2A3P11169 496 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 HOXD9P28356 352 aaPredicted RBP20.49■□□□□ 0.87
HDAC7-220ENST00000471235 CXCR3P49682 368 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 ATXN1P54253 815 aaKnown RBP20.49■□□□□ 0.87
HDAC7-220ENST00000471235 ADKP55263 362 aaKnown RBP20.49■□□□□ 0.87
HDAC7-220ENST00000471235 DEUP1Q05D60 604 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 GAS6Q14393 721 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 MPPE1Q53F39 396 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 GRAMD4Q6IC98 578 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 DRC7Q8IY82 874 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 PRSS33Q8NF86 280 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 DDI1Q8WTU0 396 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 RNF34Q969K3 372 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 MYEOVQ96EZ4 313 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 DDX50Q9BQ39 737 aaKnown RBP20.49■□□□□ 0.87
HDAC7-220ENST00000471235 IER2Q9BTL4 223 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 DEC1Q9P2X7 70 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms