RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 A0A1B0GTQ1 180 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 KIAA0391O15091 583 aaKnown RBP9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 TIMM44O43615 452 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 SLC28A2O43868 658 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 BRINP1O60477 761 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 TLR5O60602 858 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 TACC1O75410 805 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 ACO1P21399 889 aaKnown RBP9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 ATP5C1P36542 298 aaKnown RBP9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 CTSKP43235 329 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 CSRP3P50461 194 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 SFSWAPQ12872 951 aaKnown RBP9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 ENPP2Q13822 863 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 MCM6Q14566 821 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 TPD52L1Q16890 204 aaPredicted RBP9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 TBC1D25Q3MII6 688 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 PCSK4Q6UW60 755 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 FMR1NBQ8N0W7 255 aaPredicted RBP9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 LSMEM2Q8N112 164 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 LINC00301Q8NCQ3 95 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 OR2T3Q8NH03 318 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 CXorf38Q8TB03 319 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 SAAL1Q96ER3 474 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 ZNF578Q96N58 590 aaPredicted RBP9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 HNRNPABQ99729 332 aaKnown RBP9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 MED10Q9BTT4 135 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 C6orf106Q9H6K1 298 aaPredicted RBP9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 MRPL44Q9H9J2 332 aaKnown RBP9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 PDE11AQ9HCR9 933 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 INTS13Q9NVM9 706 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 SEL1LQ9UBV2 794 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 SIX4Q9UIU6 781 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 PIEZO2Q9H5I5 2752 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 MYH10P35580 1976 aa9.37□□□□□ -0.91
SYNGAP1-205ENST00000470232 A0A1B0GVL5 298 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 ZNF233A6NK53 670 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 SMTNL1A8MU46 457 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 A8MXQ7 604 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 TSPAN3O60637 253 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 FSBPO95073 299 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 SEMA4FO95754 770 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 CYBBP04839 570 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 EPHX1P07099 455 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 ZDHHC11BP0C7U3 371 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 GLDCP23378 1020 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 CHKAP35790 457 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 PLA2G4AP47712 749 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 NDUFA8P51970 172 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 SLC5A3P53794 718 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 PCBP4P57723 403 aaKnown RBP9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 RACK1P63244 317 aaKnown RBP9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 TNNC1P63316 161 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 IL9RQ01113 521 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 ZBTB16Q05516 673 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 EIF4HQ15056 248 aaKnown RBP9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 ARHGAP40Q5TG30 622 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 FBXL19Q6PCT2 694 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 USP49Q70CQ1 688 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 TADA2BQ86TJ2 420 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 FMNL3Q8IVF7 1028 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 DHX40Q8IX18 779 aaKnown RBP9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 SCAMP5Q8TAC9 235 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 TSC1Q92574 1164 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 LARP4BQ92615 738 aaKnown RBP9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 RAD54LQ92698 747 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 MED8Q96G25 268 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 ELF4Q99607 663 aaPredicted RBP9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 KLF16Q9BXK1 252 aaPredicted RBP9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 B3GNT5Q9BYG0 378 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 TRIM9Q9C026 710 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 ZNF518BQ9C0D4 1074 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 LHX5Q9H2C1 402 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 FBRSQ9HAH7 460 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 SGK2Q9HBY8 427 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 DMAP1Q9NPF5 467 aaPredicted RBP9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 ELOVL2Q9NXB9 296 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 IL37Q9NZH6 218 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 CLCA2Q9UQC9 943 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 NCKAP1Q9Y2A7 1128 aa9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 HEMK1Q9Y5R4 338 aaPredicted RBP9.36□□□□□ -0.91
SYNGAP1-205ENST00000470232 COL5A1P20908 1838 aaPredicted RBP9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 GOLGA8IPA6NC78 632 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 GOLGA8JA6NMD2 632 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 CLDN5O00501 218 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 VILLO15195 856 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 DNTTP04053 509 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 TNNT1P13805 278 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 GAP43P17677 238 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 ACSL1P33121 698 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 ARRB1P49407 418 aaPredicted RBP9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 ACADVLP49748 655 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 COPAP53621 1224 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 CACNA2D1P54289 1103 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 WNT7BP56706 349 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 E2F1Q01094 437 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 DNAJC3Q13217 504 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 ALCAMQ13740 583 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 ZNF234Q14588 700 aa9.35□□□□□ -0.91
SYNGAP1-205ENST00000470232 TTC31Q49AM3 519 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms