RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 GPR37L1O60883 481 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 MTA2O94776 668 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 IPO7O95373 1038 aaKnown RBP15.36■□□□□ 0.05
COL9A3-209ENST00000469852 ARSAP15289 507 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 GDI1P31150 447 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 GGCXP38435 758 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 VCPP55072 806 aaKnown RBP15.36■□□□□ 0.05
COL9A3-209ENST00000469852 TCEAL1Q15170 157 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 EML3Q32P44 896 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 TMEM31Q5JXX7 168 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 CYP4V2Q6ZWL3 525 aaPredicted RBP15.36■□□□□ 0.05
COL9A3-209ENST00000469852 KIAA1328Q86T90 577 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 RHOT2Q8IXI1 618 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 GJD3Q8N144 294 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 CCDC185Q8N715 623 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 DEPDC1BQ8WUY9 529 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 OSCP1Q8WVF1 389 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 MYEOVQ96EZ4 313 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 PEBP4Q96S96 227 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 FAM83CQ9BQN1 747 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 TRMT61BQ9BVS5 477 aaKnown RBP15.36■□□□□ 0.05
COL9A3-209ENST00000469852 HPS4Q9NQG7 708 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 SNX10Q9Y5X0 201 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 OTOL1A6NHN0 477 aaPredicted RBP15.35■□□□□ 0.05
COL9A3-209ENST00000469852 TMEM110-MUSTN1A8MSY1 372 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 TRDMT1O14717 391 aaKnown RBP15.35■□□□□ 0.05
COL9A3-209ENST00000469852 BUB1O43683 1085 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 LRCH4O75427 683 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 SLC6A4P31645 630 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 CCR1P32246 355 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 KPNA1P52294 538 aaPredicted RBP15.35■□□□□ 0.05
COL9A3-209ENST00000469852 PPP2R5DQ14738 602 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 FAM133BQ5BKY9 247 aaKnown RBP15.35■□□□□ 0.05
COL9A3-209ENST00000469852 IER5LQ5T953 404 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 PIK3R6Q5UE93 754 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 NUGGCQ68CJ6 796 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 YAF2Q8IY57 180 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 TTC8Q8TAM2 541 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 RNF34Q969K3 372 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 NXPE3Q969Y0 559 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 TKTL2Q9H0I9 626 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 GOLPH3Q9H4A6 298 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 EBF3Q9H4W6 596 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 LUC7LQ9NQ29 371 aaKnown RBP15.35■□□□□ 0.05
COL9A3-209ENST00000469852 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.35■□□□□ 0.05
COL9A3-209ENST00000469852 DUS2Q9NX74 493 aaKnown RBP15.35■□□□□ 0.05
COL9A3-209ENST00000469852 ARHGEF38Q9NXL2 777 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 LSM7Q9UK45 103 aaKnown RBP15.35■□□□□ 0.05
COL9A3-209ENST00000469852 PYCARDQ9ULZ3 195 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 ARIH1Q9Y4X5 557 aaPredicted RBP15.35■□□□□ 0.05
COL9A3-209ENST00000469852 TRIOO75962 3097 aa15.35■□□□□ 0.05
COL9A3-209ENST00000469852 A0A0A6YYK5 440 aaPredicted RBP15.34■□□□□ 0.05
COL9A3-209ENST00000469852 FAM86C2PA6NEL3 165 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 MYO1FO00160 1098 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 CHADO15335 359 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 ACSL4O60488 711 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 PAGE1O75459 146 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 PROSCO94903 275 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 F9P00740 461 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 APOEP02649 317 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 ARHGAP25P42331 645 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 IFNAR2P48551 515 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 HARS2P49590 506 aaKnown RBP15.34■□□□□ 0.05
COL9A3-209ENST00000469852 SGSHP51688 502 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 HADHBP55084 474 aaKnown RBP15.34■□□□□ 0.05
COL9A3-209ENST00000469852 TDGQ13569 410 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 MESDQ14696 234 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 ARTNQ5T4W7 220 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 TXNRD3NBQ6F5E7 133 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 SCYL2Q6P3W7 929 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 RFWD3Q6PCD5 774 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 UNC45BQ8IWX7 931 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 FAM217AQ8IXS0 508 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 ADGRG2Q8IZP9 1017 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 NIPA2Q8N8Q9 360 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 DCLK3Q9C098 648 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 WDCPQ9H6R7 721 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 GTSE1Q9NYZ3 720 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 PCSK1NQ9UHG2 260 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 IP6K2Q9UHH9 426 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 MUTYHQ9UIF7 546 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 STOML2Q9UJZ1 356 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 PPP2R2CQ9Y2T4 447 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 HYOU1Q9Y4L1 999 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 PAXBP1Q9Y5B6 917 aa15.34■□□□□ 0.05
COL9A3-209ENST00000469852 BTNL10A8MVZ5 291 aa15.33■□□□□ 0.04
COL9A3-209ENST00000469852 GFRA2O00451 464 aa15.33■□□□□ 0.04
COL9A3-209ENST00000469852 NRDCO43847 1150 aa15.33■□□□□ 0.04
COL9A3-209ENST00000469852 BUB1BO60566 1050 aaPredicted RBP15.33■□□□□ 0.04
COL9A3-209ENST00000469852 TSPAN3O60637 253 aa15.33■□□□□ 0.04
COL9A3-209ENST00000469852 CYP17A1P05093 508 aa15.33■□□□□ 0.04
COL9A3-209ENST00000469852 CCDC175P0C221 793 aa15.33■□□□□ 0.04
COL9A3-209ENST00000469852 IL1R2P27930 398 aa15.33■□□□□ 0.04
COL9A3-209ENST00000469852 MIPP30301 263 aa15.33■□□□□ 0.04
COL9A3-209ENST00000469852 HOXD11P31277 338 aaPredicted RBP15.33■□□□□ 0.04
COL9A3-209ENST00000469852 NOP2P46087 812 aaKnown RBP15.33■□□□□ 0.04
COL9A3-209ENST00000469852 TAS2R40P59535 323 aa15.33■□□□□ 0.04
COL9A3-209ENST00000469852 PIGHQ14442 188 aaPredicted RBP15.33■□□□□ 0.04
COL9A3-209ENST00000469852 ARHGAP29Q52LW3 1261 aa15.33■□□□□ 0.04
COL9A3-209ENST00000469852 MS4A13Q5J8X5 152 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms