RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 FAM118BQ9BPY3 351 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 RXFP1Q9HBX9 757 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 TMEM8AQ9HCN3 771 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 TDP1Q9NUW8 608 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 RAB20Q9NX57 234 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 DEC1Q9P2X7 70 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ZNF646O15015 1829 aaPredicted RBP6.21□□□□□ -1.41
SHQ1-205ENST00000468371 F8W810 466 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 SCAMP3O14828 347 aaKnown RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 CIB2O75838 187 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 FSBPO95073 299 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 SRFP11831 508 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 FGFR3P22607 806 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 CASP4P49662 377 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 DGKEP52429 567 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 GPC5P78333 572 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 SKOR1P84550 965 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 EFEMP1Q12805 493 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 SLMAPQ14BN4 828 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 PDGFRLQ15198 375 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 MEA1Q16626 185 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 CCDC157Q569K6 752 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 INTS6LQ5JSJ4 861 aaKnown RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 C10orf76Q5T2E6 689 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 DCUN1D2Q6PH85 259 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 SYCE2Q6PIF2 218 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 RNF19BQ6ZMZ0 732 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 ZC3H18Q86VM9 953 aaKnown RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 CTAGE3PQ8IX95 158 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 CHPFQ8IZ52 775 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 SLC35G2Q8TBE7 412 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 TMC2Q8TDI7 906 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 ACDQ96AP0 544 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 CYTH2Q99418 400 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 ST6GALNAC4Q9H4F1 302 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 LMAN1LQ9HAT1 526 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 FBXW11Q9UKB1 542 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 TTC7AQ9ULT0 858 aaPredicted RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 ARHGAP42A6NI28 874 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 RASA4BC9J798 803 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 TMEM189-UBE2V1I3L0A0 370 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 RASA4O43374 803 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 RNASEH1O60930 286 aaKnown RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 TROVE2P10155 538 aaKnown RBP eCLIP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 PRLRP16471 622 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 CD72P21854 359 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 VIPR2P41587 438 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 CXCL12P48061 93 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 SLC11A2P49281 568 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 CDH8P55286 799 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 ZXDAP98168 799 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 MAPK7Q13164 816 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 ORC1Q13415 861 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 MTM1Q13496 603 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 QPCTQ16769 361 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 LRIG3Q6UXM1 1119 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 PDCD7Q8N8D1 485 aaKnown RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 ARL14EPQ8N8R7 260 aaPredicted RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 B3GALNT2Q8NCR0 500 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 TSTD1Q8NFU3 115 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 FBXO25Q8TCJ0 367 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 SNX19Q92543 992 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 HAUS1Q96CS2 278 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 FUBP3Q96I24 572 aaKnown RBP eCLIP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 SPACA7Q96KW9 195 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 ZMAT2Q96NC0 199 aaKnown RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 DCLK3Q9C098 648 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 POLMQ9NP87 494 aaPredicted RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 OSGEPQ9NPF4 335 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 DYRK4Q9NR20 520 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 HCFC1R1Q9NWW0 138 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 TTC3P53804 2025 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 A0A0G2JND7 137 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 EXOC1LA0A1B0GW35 172 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 SLC12A8A0AV02 714 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 WDR27A2RRH5 827 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 MTMR11A4FU01 709 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 PRR33A8MZF0 331 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 UBOX5O94941 541 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 FTLP02792 175 aaPredicted RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 LRPAP1P30533 357 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 PPP3CCP48454 512 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 IFI35P80217 286 aaPredicted RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 TAF10Q12962 218 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 CFAP157Q5JU67 520 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 SV2AQ7L0J3 742 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 CMASQ8NFW8 434 aaPredicted RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 DTX3LQ8TDB6 740 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 SLC2A14Q8TDB8 520 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 PRCCQ92733 491 aaPredicted RBP6.21□□□□□ -1.42
SHQ1-205ENST00000468371 ATP2A3Q93084 1043 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 CEP63Q96MT8 703 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 NUDCD1Q96RS6 583 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 LRFN3Q9BTN0 628 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 MARCH5Q9NX47 278 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 CFAP97Q9P2B7 532 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 SALL4Q9UJQ4 1053 aa6.21□□□□□ -1.42
SHQ1-205ENST00000468371 TPRP12270 2363 aaKnown RBP6.2□□□□□ -1.42
SHQ1-205ENST00000468371 TMEM120BA0PK00 339 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms