RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 SOX5P35711 763 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 TBX4P57082 545 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 POLR2FP61218 127 aaKnown RBP15.78■□□□□ 0.12
ATG4B-215ENST00000468018 PITX1P78337 314 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-215ENST00000468018 SRSF5Q13243 272 aaKnown RBP15.78■□□□□ 0.12
ATG4B-215ENST00000468018 IQCB1Q15051 598 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 MPPE1Q53F39 396 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 EOGTQ5NDL2 527 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 HEATR6Q6AI08 1181 aaKnown RBP15.78■□□□□ 0.12
ATG4B-215ENST00000468018 NADSYN1Q6IA69 706 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 NUDT18Q6ZVK8 323 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 FAM183BPQ6ZVS7 135 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 SLC26A9Q7LBE3 791 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 ZNF677Q86XU0 584 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 ZDHHC17Q8IUH5 632 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 CCDC33Q8N5R6 958 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 ZNF513Q8N8E2 541 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-215ENST00000468018 GAB3Q8WWW8 586 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 RUBCNQ92622 972 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 BHMTQ93088 406 aa15.78■□□□□ 0.12
ATG4B-215ENST00000468018 FAM207AQ9NSI2 230 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-215ENST00000468018 AXIN1O15169 862 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 ACSL4O60488 711 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 HSF2BPO75031 334 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 LSM8O95777 96 aaKnown RBP15.77■□□□□ 0.12
ATG4B-215ENST00000468018 TRUB2O95900 331 aaKnown RBP15.77■□□□□ 0.12
ATG4B-215ENST00000468018 CYBBP04839 570 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 SCNN1AP37088 669 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 PXNP49023 591 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-215ENST00000468018 SGSHP51688 502 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 DGKEP52429 567 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 NOMO3P69849 1222 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 SLC6A3Q01959 620 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 ENPP2Q13822 863 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 GEN1Q17RS7 908 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 EFHC1Q5JVL4 640 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 MPP7Q5T2T1 576 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 PIK3R6Q5UE93 754 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 EGFLAMQ63HQ2 1017 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 TRMT11Q7Z4G4 463 aaKnown RBP15.77■□□□□ 0.12
ATG4B-215ENST00000468018 KIAA0907Q7Z7F0 614 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-215ENST00000468018 DEFB106AQ8N104 65 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.77■□□□□ 0.12
ATG4B-215ENST00000468018 TMEM35BQ8NCS4 154 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 ADAM32Q8TC27 787 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 GABRG3Q99928 467 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 ZDHHC4Q9NPG8 344 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 NLRC4Q9NPP4 1024 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 CEP83Q9Y592 693 aa15.77■□□□□ 0.12
ATG4B-215ENST00000468018 NYNRINQ9P2P1 1898 aaKnown RBP15.76■□□□□ 0.11
ATG4B-215ENST00000468018 A0A1W2PQF6 199 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 SMTNL1A8MU46 457 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 CAPN9O14815 690 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 CYP1A1P04798 512 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-215ENST00000468018 MMEP08473 750 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 CHRNB2P17787 502 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 CDK11BP21127 795 aaKnown RBP15.76■□□□□ 0.11
ATG4B-215ENST00000468018 TGM1P22735 817 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 ZNF165P49910 485 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 SNX16P57768 344 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 FMO1Q01740 532 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 UBXN1Q04323 297 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 SIM2Q14190 667 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-215ENST00000468018 OTUD1Q5VV17 481 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-215ENST00000468018 MDGA1Q8NFP4 955 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 TSTD1Q8NFU3 115 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 OLIG1Q8TAK6 271 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 IPO4Q8TEX9 1081 aaKnown RBP15.76■□□□□ 0.11
ATG4B-215ENST00000468018 DDI1Q8WTU0 396 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 NT5C3BQ969T7 300 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 PRICKLE1Q96MT3 831 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-215ENST00000468018 ACOX2Q99424 681 aa15.76■□□□□ 0.11
ATG4B-215ENST00000468018 RTN4Q9NQC3 1192 aaKnown RBP15.76■□□□□ 0.11
ATG4B-215ENST00000468018 DCHS1Q96JQ0 3298 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 GOLGA6L7A0A1B0GV03 622 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 KCNU1A8MYU2 1149 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 TEX33O43247 280 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 DAB1O75553 588 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 GFPT2O94808 682 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 PTMSP20962 102 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 HLA-FP30511 346 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 NTSR1P30989 418 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 SLC11A2P49281 568 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 CDR2Q01850 454 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 EIF4HQ15056 248 aaKnown RBP15.75■□□□□ 0.11
ATG4B-215ENST00000468018 DCAF6Q58WW2 860 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 TAF3Q5VWG9 929 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 TMEM215Q68D42 235 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 LAIR1Q6GTX8 287 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 OR6B2Q6IFH4 312 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 ANKS1BQ7Z6G8 1248 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 XYLT1Q86Y38 959 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 DCLK2Q8N568 766 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 SLC20A1Q8WUM9 679 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 TMA16Q96EY4 203 aaKnown RBP15.75■□□□□ 0.11
ATG4B-215ENST00000468018 MYEOVQ96EZ4 313 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 ZC3H10Q96K80 434 aaKnown RBP15.75■□□□□ 0.11
ATG4B-215ENST00000468018 LMLNQ96KR4 655 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 ADAM33Q9BZ11 813 aa15.75■□□□□ 0.11
ATG4B-215ENST00000468018 NUCKS1Q9H1E3 243 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms